Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G538500.1 | Wheat | plastid | 96.18 | 93.79 |
| TraesCS5D01G556800.1 | Wheat | mitochondrion | 89.17 | 88.61 |
| HORVU5Hr1G123210.2 | Barley | cytosol | 86.62 | 88.31 |
| Os03t0852500-01 | Rice | cytosol, mitochondrion, plastid | 67.52 | 67.09 |
| EER90499 | Sorghum | cytosol, mitochondrion, plastid | 68.15 | 66.88 |
| Zm00001d012833_P002 | Maize | mitochondrion | 58.6 | 54.76 |
| GSMUA_Achr11P... | Banana | mitochondrion | 47.77 | 49.02 |
| VIT_02s0025g03090.t01 | Wine grape | mitochondrion | 40.13 | 44.68 |
| Bra003821.1-P | Field mustard | mitochondrion | 32.48 | 42.86 |
| AT1G73940.1 | Thale cress | mitochondrion | 38.22 | 39.74 |
| GSMUA_Achr5P20420_001 | Banana | plastid | 40.76 | 39.02 |
| Bra015953.1-P | Field mustard | mitochondrion | 38.85 | 38.36 |
| CDX96497 | Canola | mitochondrion | 38.22 | 37.97 |
| CDX73027 | Canola | mitochondrion | 36.94 | 36.94 |
| CDY63166 | Canola | mitochondrion | 36.94 | 36.48 |
| TraesCS7A01G557000.1 | Wheat | mitochondrion | 18.47 | 23.77 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G325600.1 | EnsemblPlantsGene:TraesCS4A01G325600 | PANTHER:PTHR35110 | PANTHER:PTHR35110:SF2 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr4A:+:613322410..613325605
Molecular Weight (calculated)
17285.8 Da
IEP (calculated)
10.900
GRAVY (calculated)
-0.666
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MQFLRGVGGG GGGAGSTAWE AFRRHFSRKR AVDIRRINPK VPKEEAVAIS GRLLQILADH GPLTVGNTWN HAKDAAIDGL NSKTHMKILL KWMWGRRIIK
101: LSCTQAGNTK KFLYSPFTAD DAEAAEEPSP AEEQPKKKGW KGKHPKYQTK KQPAAAA
101: LSCTQAGNTK KFLYSPFTAD DAEAAEEPSP AEEQPKKKGW KGKHPKYQTK KQPAAAA
001: MWFAGGGGGL RKLCRASAIF DNEISYNSLL VRYMSRERAV NVRKINPKVP IQEAYAISNS LYDLFKLHGP LSVPNTWLRA QEAGVSGLNS KTHMKLLLKW
101: MRGKKMLKLI CNQVGSSKKF FHTVLPEDPL QEQPAAPIEN KKQAVKKKRS K
101: MRGKKMLKLI CNQVGSSKKF FHTVLPEDPL QEQPAAPIEN KKQAVKKKRS K
Arabidopsis Description
At1g73940/F2P9_19 [Source:UniProtKB/TrEMBL;Acc:Q9C9B5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.