Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 6
- golgi 6
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX80652 | Canola | extracellular | 97.33 | 97.33 |
| CDY69362 | Canola | extracellular | 96.0 | 92.31 |
| AT4G30064.1 | Thale cress | extracellular | 46.67 | 44.87 |
| AT2G29045.1 | Thale cress | extracellular | 44.0 | 42.31 |
| Bra013101.1-P | Field mustard | extracellular | 37.33 | 35.0 |
| Bra036691.1-P | Field mustard | extracellular | 41.33 | 28.97 |
Protein Annotations
Description
AT4G30064 (E=2e-015) LCR61 | LCR61 (Low-molecular-weight cysteine-rich 61)
Coordinates
chrA06:-:18324158..18324626
Molecular Weight (calculated)
7945.7 Da
IEP (calculated)
4.103
GRAVY (calculated)
0.392
Length
75 amino acids
Sequence
(BLAST)
(BLAST)
1: MAKSTSSLVV AIIYLMMFSL VEENMGCEVD YGSCKEIGNC EVMCMVKFGS AATGYCAGGN ETGRCYCDFP GPCIG
1: MAKTASSLVL PIIFLVMFAL VEQNMGCMAV LGSCGVITDC SGECISRFGP QARGYCDRDG GSGTCVCVYP CPADKPHM
Arabidopsis Description
LCR61Defensin-like protein 171 [Source:UniProtKB/Swiss-Prot;Acc:P82775]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.