Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009961.1-P | Field mustard | extracellular | 92.31 | 96.0 |
| CDX80652 | Canola | extracellular | 92.31 | 96.0 |
| AT4G30064.1 | Thale cress | extracellular | 43.59 | 43.59 |
| CDY39762 | Canola | extracellular | 42.31 | 41.77 |
| AT2G29045.1 | Thale cress | extracellular | 41.03 | 41.03 |
| CDY69877 | Canola | extracellular | 35.9 | 40.58 |
| CDX89668 | Canola | extracellular | 35.9 | 40.58 |
| CDY16331 | Canola | extracellular | 39.74 | 40.26 |
| CDX91173 | Canola | extracellular | 37.18 | 39.19 |
| CDX91571 | Canola | extracellular | 38.46 | 38.96 |
| CDY43552 | Canola | extracellular | 38.46 | 38.46 |
| CDX89666 | Canola | extracellular | 35.9 | 38.36 |
| CDY70383 | Canola | extracellular | 35.9 | 38.36 |
| CDX83792 | Canola | extracellular | 42.31 | 37.93 |
| CDX96684 | Canola | extracellular | 41.03 | 36.78 |
| CDX83795 | Canola | extracellular | 41.03 | 36.78 |
| CDY02283 | Canola | extracellular | 32.05 | 31.25 |
Protein Annotations
| EnsemblPlants:CDY69362 | EnsemblPlantsGene:GSBRNA2T00087037001 | GO:A0A078JV45 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PFAM:PD629468 | ProteinID:CDY69362 | ProteinID:CDY69362.1 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EF0012 |
| UniProt:A0A078JV45 | MapMan:35.2 | : | : | : | : |
Description
BnaAnng30190DBnaAnng30190D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JV45]
Coordinates
chrLK039244:-:3128..3595
Molecular Weight (calculated)
8244.0 Da
IEP (calculated)
4.173
GRAVY (calculated)
0.301
Length
78 amino acids
Sequence
(BLAST)
(BLAST)
1: EASKAKSTSS LVVAIIYLMM FSLVEENMGC EVDYGSCKDI GNCEVMCMVK FGSAATGYCV GGNETGRCYC DFPGPCIG
1: MAKTASSLVL PIIFLVMFAL VEQNMGCMAV LGSCGVITDC SGECISRFGP QARGYCDRDG GSGTCVCVYP CPADKPHM
Arabidopsis Description
LCR61Defensin-like protein 171 [Source:UniProtKB/Swiss-Prot;Acc:P82775]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.