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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 4
  • golgi 4
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
EpiLoc:vacuole
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:plastid
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX87657 Canola extracellular 100.0 100.0
Bra008226.1-P Field mustard extracellular 64.91 46.25
Bra003740.1-P Field mustard extracellular 61.4 43.75
Bra015811.1-P Field mustard extracellular 59.65 42.5
Bra015809.1-P Field mustard extracellular 57.89 41.77
Bra008225.1-P Field mustard extracellular 54.39 38.75
Bra025396.1-P Field mustard extracellular 47.37 33.75
Bra004900.1-P Field mustard extracellular 42.11 30.0
Protein Annotations
EnsemblPlants:Bra015808.1EnsemblPlants:Bra015808.1-PEnsemblPlantsGene:Bra015808SEG:segSignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0002541FECUniProt:M4DH31MapMan:35.2:::
Description
No Description!
Coordinates
chrA07:+:20759897..20760229
Molecular Weight (calculated)
6162.6 Da
IEP (calculated)
4.791
GRAVY (calculated)
0.721
Length
57 amino acids
Sequence
(BLAST)
1: MAKFASIVAL LFAALVLFAA FEAPTMVEAV QKLCERPSGT CQESVETIMH ARISAFD
Best Arabidopsis Sequence Match ( AT5G44420.1 )
(BLAST)
1: MAKFASIITL IFAALVLFAA FDAPAMVEAQ KLCEKPSGTW SGVCGNSNAC KNQCINLEGA KHGSCNYVFP AHKCICYVPC
Arabidopsis Description
PDF1.2ADefensin-like protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9FI23]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.