Skip to main content
crop-pal logo
Field mustard
Search for another protein from :
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 7
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
EpiLoc:vacuole
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX87658 Canola extracellular 100.0 100.0
Bra008226.1-P Field mustard extracellular 91.14 90.0
Bra015811.1-P Field mustard extracellular 91.14 90.0
Bra003740.1-P Field mustard extracellular 89.87 88.75
Bra008225.1-P Field mustard extracellular 73.42 72.5
Bra015808.1-P Field mustard extracellular 41.77 57.89
Bra004900.1-P Field mustard extracellular 50.63 50.0
Bra025396.1-P Field mustard extracellular 49.37 48.75
Protein Annotations
EnsemblPlants:Bra015809.1EnsemblPlants:Bra015809.1-PEnsemblPlantsGene:Bra015809Gene3D:3.30.30.10GO:GO:0006950GO:GO:0006952
GO:GO:0008150InterPro:Defensin_plantInterPro:IPR036574InterPro:Scorpion_toxin-likeInterPro:Scorpion_toxin-like_sfPANTHER:PTHR33147
PANTHER:PTHR33147:SF4PFAM:PF00304ScanProsite:PS00940SEG:segSignalP:SignalP-noTMSMART:SM00505
SUPFAM:SSF57095TMHMM:TMhelixUniParc:UPI000012566CUniProt:M4DH32MapMan:26.8.3.2.1:
Description
AT2G26020 (E=1e-031) PDF1.2b | PDF1.2b (plant defensin 1.2b)
Coordinates
chrA07:+:20757660..20757996
Molecular Weight (calculated)
8555.4 Da
IEP (calculated)
7.979
GRAVY (calculated)
0.411
Length
79 amino acids
Sequence
(BLAST)
1: MAKFASIITL LFAALVVFAA FEAPTMVEAK LCERSSGTWS GVCGNNNACK NQCIRLEGAQ HGSCNYVFPA HKCICYFPC
Best Arabidopsis Sequence Match ( AT5G44420.1 )
(BLAST)
1: MAKFASIITL IFAALVLFAA FDAPAMVEAQ KLCEKPSGTW SGVCGNSNAC KNQCINLEGA KHGSCNYVFP AHKCICYVPC
Arabidopsis Description
PDF1.2ADefensin-like protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9FI23]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.