Skip to main content
crop-pal logo
Field mustard
Search for another protein from :
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 7
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
EpiLoc:vacuole
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY39061 Canola extracellular 100.0 100.0
CDY13531 Canola extracellular 98.75 98.75
Bra008226.1-P Field mustard extracellular 75.0 75.0
Bra003740.1-P Field mustard extracellular 73.75 73.75
Bra015809.1-P Field mustard extracellular 72.5 73.42
Bra015811.1-P Field mustard extracellular 70.0 70.0
Bra015808.1-P Field mustard extracellular 38.75 54.39
Bra004900.1-P Field mustard extracellular 51.25 51.25
Bra025396.1-P Field mustard extracellular 50.0 50.0
Protein Annotations
EnsemblPlants:Bra008225.1EnsemblPlants:Bra008225.1-PEnsemblPlantsGene:Bra008225Gene3D:3.30.30.10GO:GO:0006950GO:GO:0006952
GO:GO:0008150InterPro:Defensin_plantInterPro:IPR036574InterPro:Scorpion_toxin-likeInterPro:Scorpion_toxin-like_sfPANTHER:PTHR33147
PANTHER:PTHR33147:SF4PFAM:PF00304ScanProsite:PS00940SEG:segSignalP:SignalP-noTMSMART:SM00505
SUPFAM:SSF57095TMHMM:TMhelixUniParc:UPI0002545D3AUniProt:M4CVH8MapMan:26.8.3.2.1:
Description
AT1G75830 (E=1e-023) LCR67, PDF1.1 | LCR67
Coordinates
chrA02:+:13923938..13924272
Molecular Weight (calculated)
8919.0 Da
IEP (calculated)
8.769
GRAVY (calculated)
0.065
Length
80 amino acids
Sequence
(BLAST)
1: MAKFASIITL IFAALILFAA FEAPTKVEGQ KLCRKPSGTW SGLCANSDAC RKQCIRLEKA RDGSCKYEFP AHKCFCYYPC
Best Arabidopsis Sequence Match ( AT5G44420.1 )
(BLAST)
1: MAKFASIITL IFAALVLFAA FDAPAMVEAQ KLCEKPSGTW SGVCGNSNAC KNQCINLEGA KHGSCNYVFP AHKCICYVPC
Arabidopsis Description
PDF1.2ADefensin-like protein 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9FI23]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.