Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69319 | Canola | extracellular | 98.04 | 98.04 |
| CDY69310 | Canola | extracellular | 94.77 | 95.39 |
| Bra020976.1-P | Field mustard | extracellular | 49.67 | 48.41 |
| Bra011987.1-P | Field mustard | extracellular | 48.37 | 44.85 |
| AT2G26370.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 46.41 | 41.04 |
Protein Annotations
Description
AT2G26370 (E=2e-014) | MD-2-related lipid recognition domain-containing protein / ML domain-containing protein
Coordinates
chrA02:-:1592596..1593771
Molecular Weight (calculated)
16639.0 Da
IEP (calculated)
4.724
GRAVY (calculated)
0.052
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MAISYVQPLL LLLGSLFFLP ALRAVNFEYC NKSGYDFGNV THVNISPNPV GPDVGELSIT VIGYAKESIH TGSIEVYAKS ENITDLLRKQ PCTIESGTKF
101: VLPLSEVPKD ILEGNYKYGV SLLDEKVGDS KEAKVRMCVD FDLPTSSSTL SSA
101: VLPLSEVPKD ILEGNYKYGV SLLDEKVGDS KEAKVRMCVD FDLPTSSSTL SSA
001: MAISHAQPVL LLLSSLYFLS AFGAGAYNFE NCKNAPIDYN YGITNVTRVE ISPYPVGPYD EPTITISGFT SDDSYIIYRA TIHVLYKYEN VNSTIINYDL
101: SDVMGEDPCS IEPGEKFVLT LSKVPGLQSL PHKDKSKIVI SLVDEYGDDA EVPLLKMCVE FDNPAPTTTS VSA
101: SDVMGEDPCS IEPGEKFVLT LSKVPGLQSL PHKDKSKIVI SLVDEYGDDA EVPLLKMCVE FDNPAPTTTS VSA
Arabidopsis Description
At2g26370 [Source:UniProtKB/TrEMBL;Acc:O48704]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.