Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 5
- extracellular 6
- vacuole 5
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69319 | Canola | extracellular | 41.62 | 47.06 |
| CDY69310 | Canola | extracellular | 41.04 | 46.71 |
| Bra028884.1-P | Field mustard | extracellular | 41.04 | 46.41 |
| AT5G23820.1 | Thale cress | extracellular | 35.26 | 37.2 |
| CDY09273 | Canola | endoplasmic reticulum, plasma membrane | 36.99 | 36.36 |
| CDX76495 | Canola | extracellular | 35.84 | 35.23 |
| Bra020976.1-P | Field mustard | extracellular | 31.79 | 35.03 |
| AT5G23840.1 | Thale cress | extracellular | 33.53 | 34.73 |
| AT5G23830.1 | Thale cress | extracellular | 30.64 | 32.32 |
Protein Annotations
| MapMan:35.2 | EntrezGene:817177 | ProteinID:AAC14488.1 | ProteinID:AEC07830.1 | EMBL:AK175178 | ArrayExpress:AT2G26370 |
| EnsemblPlantsGene:AT2G26370 | RefSeq:AT2G26370 | TAIR:AT2G26370 | RefSeq:AT2G26370-TAIR-G | EnsemblPlants:AT2G26370.1 | TAIR:AT2G26370.1 |
| EMBL:AY954801 | Unigene:At.38906 | EMBL:BT010495 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0032366 | InterPro:ML_PG-PI_TP | InterPro:ML_dom | RefSeq:NP_180205.1 |
| UniProt:O48704 | PFAM:PF02221 | PANTHER:PTHR11306 | PANTHER:PTHR11306:SF13 | SMART:SM00737 | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI00000A7117 | SEG:seg | : | : | : |
Description
At2g26370 [Source:UniProtKB/TrEMBL;Acc:O48704]
Coordinates
chr2:+:11224565..11226235
Molecular Weight (calculated)
19016.5 Da
IEP (calculated)
4.169
GRAVY (calculated)
0.001
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MAISHAQPVL LLLSSLYFLS AFGAGAYNFE NCKNAPIDYN YGITNVTRVE ISPYPVGPYD EPTITISGFT SDDSYIIYRA TIHVLYKYEN VNSTIINYDL
101: SDVMGEDPCS IEPGEKFVLT LSKVPGLQSL PHKDKSKIVI SLVDEYGDDA EVPLLKMCVE FDNPAPTTTS VSA
101: SDVMGEDPCS IEPGEKFVLT LSKVPGLQSL PHKDKSKIVI SLVDEYGDDA EVPLLKMCVE FDNPAPTTTS VSA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.