Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69319 | Canola | extracellular | 97.37 | 96.73 |
| Bra028884.1-P | Field mustard | extracellular | 95.39 | 94.77 |
| CDX76495 | Canola | extracellular | 57.89 | 50.0 |
| CDY09273 | Canola | endoplasmic reticulum, plasma membrane | 57.89 | 50.0 |
| CDY04522 | Canola | extracellular | 47.37 | 43.64 |
| CDX71401 | Canola | extracellular | 46.05 | 42.42 |
| AT2G26370.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 46.71 | 41.04 |
| CDY15040 | Canola | cytosol, extracellular | 27.63 | 35.59 |
Protein Annotations
| EnsemblPlants:CDY69310 | EnsemblPlantsGene:GSBRNA2T00086562001 | InterPro:ML_dom | PANTHER:PTHR11306 | PANTHER:PTHR11306:SF13 | PFAM:PF02221 |
| ProteinID:CDY69310 | ProteinID:CDY69310.1 | SEG:seg | SignalP:SignalP-noTM | SMART:SM00737 | TMHMM:TMhelix |
| UniParc:UPI0004EC3AC5 | UniProt:A0A078JSD8 | MapMan:35.2 | : | : | : |
Description
BnaCnng62970DBnaCnng62970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JSD8]
Coordinates
chrLK039105:+:547..1981
Molecular Weight (calculated)
16538.8 Da
IEP (calculated)
4.592
GRAVY (calculated)
0.138
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MAISYVQPLL LLVSLFFLPA LHAVNFEYCN KSGYDFGNVT HVNISPNPVG PDVGELSITV IGHAKESIHA GSIEVYAKSE NITDLLRKQP CTIESGTKFV
101: LPLSEVPMDI LEGDYKYVVS LLDEKVGDSK EAKVRMCVDF DLPTSSSTLS SA
101: LPLSEVPMDI LEGDYKYVVS LLDEKVGDSK EAKVRMCVDF DLPTSSSTLS SA
001: MAISHAQPVL LLLSSLYFLS AFGAGAYNFE NCKNAPIDYN YGITNVTRVE ISPYPVGPYD EPTITISGFT SDDSYIIYRA TIHVLYKYEN VNSTIINYDL
101: SDVMGEDPCS IEPGEKFVLT LSKVPGLQSL PHKDKSKIVI SLVDEYGDDA EVPLLKMCVE FDNPAPTTTS VSA
101: SDVMGEDPCS IEPGEKFVLT LSKVPGLQSL PHKDKSKIVI SLVDEYGDDA EVPLLKMCVE FDNPAPTTTS VSA
Arabidopsis Description
At2g26370 [Source:UniProtKB/TrEMBL;Acc:O48704]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.