Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028884.1-P | Field mustard | extracellular | 98.04 | 98.04 |
| CDY69310 | Canola | extracellular | 96.73 | 97.37 |
| CDX76495 | Canola | extracellular | 58.82 | 51.14 |
| CDY09273 | Canola | endoplasmic reticulum, plasma membrane | 58.82 | 51.14 |
| CDY04522 | Canola | extracellular | 48.37 | 44.85 |
| CDX71401 | Canola | extracellular | 47.06 | 43.64 |
| AT2G26370.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 47.06 | 41.62 |
| CDY15040 | Canola | cytosol, extracellular | 26.8 | 34.75 |
Protein Annotations
| EnsemblPlants:CDY69319 | EnsemblPlantsGene:GSBRNA2T00086593001 | InterPro:ML_dom | PANTHER:PTHR11306 | PANTHER:PTHR11306:SF13 | PFAM:PF02221 |
| ProteinID:CDY69319 | ProteinID:CDY69319.1 | SEG:seg | SignalP:SignalP-noTM | SMART:SM00737 | TMHMM:TMhelix |
| UniParc:UPI0004EEF20C | UniProt:A0A078JRA1 | MapMan:35.2 | : | : | : |
Description
BnaAnng29980DBnaAnng29980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JRA1]
Coordinates
chrLK039130:+:912..2358
Molecular Weight (calculated)
16652.0 Da
IEP (calculated)
4.595
GRAVY (calculated)
0.098
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MAISYVQPLL LLLGSLFFLP ALRAVNFEYC NKSGYDFGNV THVNISPNPV GPDVGELSIT VIGYAKESIH AGSIEVYAKS ENITDLLRKQ PCTIESGTKF
101: VLPLSEVPKD ILEGDYKYVV SLLDEKVGDS KEAKVRMCVD FDLPTSSSTL SSA
101: VLPLSEVPKD ILEGDYKYVV SLLDEKVGDS KEAKVRMCVD FDLPTSSSTL SSA
001: MAISHAQPVL LLLSSLYFLS AFGAGAYNFE NCKNAPIDYN YGITNVTRVE ISPYPVGPYD EPTITISGFT SDDSYIIYRA TIHVLYKYEN VNSTIINYDL
101: SDVMGEDPCS IEPGEKFVLT LSKVPGLQSL PHKDKSKIVI SLVDEYGDDA EVPLLKMCVE FDNPAPTTTS VSA
101: SDVMGEDPCS IEPGEKFVLT LSKVPGLQSL PHKDKSKIVI SLVDEYGDDA EVPLLKMCVE FDNPAPTTTS VSA
Arabidopsis Description
At2g26370 [Source:UniProtKB/TrEMBL;Acc:O48704]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
SUBAcon: [endoplasmic reticulum,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.