Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07170 | Canola | nucleus | 90.91 | 88.61 |
| Bra008539.1-P | Field mustard | cytosol, mitochondrion, nucleus | 81.82 | 81.82 |
| Bra000941.1-P | Field mustard | nucleus | 80.52 | 81.58 |
| CDY48500 | Canola | nucleus | 81.82 | 77.78 |
| AT4G01060.1 | Thale cress | nucleus | 76.62 | 76.62 |
| Bra032635.1-P | Field mustard | cytosol, nucleus, peroxisome | 71.43 | 67.07 |
| Bra039283.1-P | Field mustard | nucleus | 64.94 | 58.82 |
| Bra004539.1-P | Field mustard | nucleus | 63.64 | 57.65 |
| Bra026297.1-P | Field mustard | cytosol, nucleus, peroxisome | 36.36 | 51.85 |
| Bra022637.1-P | Field mustard | nucleus | 33.77 | 34.67 |
Protein Annotations
| EnsemblPlants:Bra037388.1 | EnsemblPlants:Bra037388.1-P | EnsemblPlantsGene:Bra037388 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:SANT/Myb | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF631 |
| PFAM:PF00249 | SEG:seg | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI00025420F2 | UniProt:M4F8H6 |
| MapMan:15.5.2.2 | : | : | : | : | : |
Description
AT4G01060 (E=2e-021) ETC3, CPL3 | CPL3 (CAPRICE-LIKE MYB3); DNA binding / transcription factor
Coordinates
chrA09:+:761835..762294
Molecular Weight (calculated)
8985.8 Da
IEP (calculated)
7.525
GRAVY (calculated)
-0.808
Length
77 amino acids
Sequence
(BLAST)
(BLAST)
1: MDKHLRTKQA KTNPTVASSS TEEVSSLEWE AVNMNQEEED LICRMHKLVG NRWELIAGRI PGRTAEEVER FWVMKKK
1: MDNHRRTKQP KTNSIVTSSS EVSSLEWEVV NMSQEEEDLV SRMHKLVGDR WELIAGRIPG RTAGEIERFW VMKN
Arabidopsis Description
ETC3CAPRICE-like MYB3 [Source:TAIR;Acc:AT4G01060]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.