CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX67642	Canola	cytosol	9.26	11.19
CDY68398	Canola	cytosol	9.26	11.19
CDY25697	Canola	cytosol	8.64	10.77
CDX72145	Canola	cytosol	8.64	10.45
CDY27223	Canola	cytosol, mitochondrion	8.64	10.14
CDY07599	Canola	plastid	9.26	9.09
CDY24898	Canola	cytosol, plastid	9.26	9.09
CDY06976	Canola	cytosol	9.26	8.57
CDX75988	Canola	cytosol	8.64	7.91
CDY50450	Canola	mitochondrion	8.64	7.91

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	GO:A0A078BXF9	EnsemblPlants:CDX67643	ProteinID:CDX67643	ProteinID:CDX67643.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00098805001	InterPro:IPR003441
InterPro:IPR036093	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR44908
SUPFAM:SSF101941	UniParc:UPI0004EE2DBF	:	:	:	:

Description

BnaA07g16830D

Coordinates

chrLK031787:-:1516643..1517242

Molecular Weight (calculated)

18400.8 Da

IEP (calculated)

4.958

GRAVY (calculated)

-0.322

Length

162 amino acids

Sequence
(BLAST)

001: MEQAPLPANV VESITSFQLH RNLNLPPGYG FHASDEQLLQ LFLGPFVDGR DQKTCPIHNI TGDVYSSSPD VLTGAYEHDG EDKWFFFCTN KYDDDVTSRA
101: GRVIVGGGGE WVKMGPIKKL FANITLLGFK RTQDFYVQGM DLSYWRMEEL SLRDKVCIDL YH

Best Arabidopsis Sequence Match ( AT3G56530.1 )
(BLAST)

001: MAIPQRNKRK ARSSPERLTQ PPELPHNSDV PSSSSSSAAD NFFSWSTKQF AFPPGYRFVP KDQELIFHYL KPFSQGNKCS LLNVPIHRVN IYESNPQHLS
101: EKYEKGNDKD WFYISERTKT GKAGRSNKRV DNGGYWSATV AAQKINAGNG IVGYKTSLEY YVGKQSNSVK GDWLMQEYWF ESSDDNNNEK VDHALCKIYL
201: TPAAAKKKKA EEAENEKLKK EEDVEQLDLN QPDQLQLQQP HDIVYQPQYC LLPEHHQPQP FPDNFSELIS FQQQPVMIPD DFEDFLAEFT KPHSLDGDEE
301: FNNYGLFEGF FDTEGMIKH

Arabidopsis Description

anac064NAC064 [Source:UniProtKB/TrEMBL;Acc:A0A178V9P9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.