Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 3
- cytosol 1
- plasma membrane 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27621 | Canola | plasma membrane, plastid | 93.61 | 94.47 |
| CDY11788 | Canola | plastid | 86.15 | 83.48 |
| AT1G27595.1 | Thale cress | nucleus | 84.09 | 83.4 |
| CDX90095 | Canola | plastid | 84.55 | 82.66 |
| CDY11784 | Canola | cytosol | 13.17 | 72.08 |
| CDY11783 | Canola | endoplasmic reticulum, plasma membrane | 8.37 | 67.9 |
| VIT_18s0001g08130.t01 | Wine grape | extracellular, plasma membrane, plastid | 11.11 | 60.33 |
| KRH52859 | Soybean | nucleus | 53.12 | 51.93 |
| KRH62152 | Soybean | plasma membrane | 53.04 | 51.9 |
| VIT_18s0001g08140.t01 | Wine grape | mitochondrion | 41.63 | 51.27 |
| Solyc04g076910.2.1 | Tomato | nucleus | 39.57 | 45.22 |
| CDY04840 | Canola | plastid | 32.5 | 29.35 |
Protein Annotations
| EnsemblPlants:CDX84921 | EnsemblPlantsGene:GSBRNA2T00142270001 | Gene3D:1.25.10.10 | GO:GO:0003674 | GO:GO:0005488 | InterPro:ARM-like |
| InterPro:ARM-type_fold | InterPro:IPR011989 | InterPro:Symplekin/Pta1_N | InterPro:Symplekin_C | ncoils:Coil | PANTHER:PTHR15245 |
| PANTHER:PTHR15245:SF35 | PFAM:PF11935 | PFAM:PF12295 | ProteinID:CDX84921 | ProteinID:CDX84921.1 | SEG:seg |
| SUPFAM:SSF48371 | UniParc:UPI0004EE7FEE | MapMan:16.2.1.2.9 | : | : | : |
Description
BnaC05g21340D
Coordinates
chrLK031839:-:222564..233773
Molecular Weight (calculated)
144412.0 Da
IEP (calculated)
6.653
GRAVY (calculated)
-0.095
Length
1314 amino acids
Sequence
(BLAST)
(BLAST)
0001: MATAARAQAL SLLAAANNHG DLAVKLSSLR QVKELLLSLE PSLSAEIFPY LAELHSSPET RVRKSLVEII EDVGLRMLDH SYVLLTVLLV LAKDEDPVVA
0101: KNAISVGTAF YCTILEEMAM QFHHRGKVYR WVGELWTWMV KFKDAVFSTA LEPGCVGVKV LALKFMETFI LLFTPDASDP EKIFNEGSRK MFNISWLVGG
0201: HPILNSAMLM SEANRTFGIL LDLIHSAGRL PGALTITVVS CLAVVARKRP VHYNSFLSVL LDFHPNLESV KGCHAASVQY SIRTALLGFL RCTSSPMIES
0301: RDKLLRALRA MNAADVANQV LRQVDKLIRN NERAARENWS GKNNQAINHQ NSWDLSKKRI MPQGEDDTVN GEVAPKRLRH NNNMHLTPKG QISDSPHGTV
0401: SINGISSGNH PSDSEPTPVE QMVSMIGALL AEGDRGASSL EILISKLHPD MLADIVITSM KHLPSNPPTL TTSLATPADI VVSSSINPMR SPTRQPQLPF
0501: DSTLPFGSSL SDVPSLNAVV DPRRDPRRDP RRMDPRRSNP SVGPTSLPGD EGKETVPVQM DISTVASKPP SVPDVTAGTG GSVHPTTVDH SQNKVMGSSI
0601: IRRIDQPDCR EDLLPIPKEY GYLSKGKSPL DVPLSPCRDD EGIRNTKLDL DLVSVPDFNQ HSPSEAGPDF ELHPPVDSNI TAAEESYREL APVPSYVELT
0701: TEQSNTVGKL ALQRIIESNR HVCGFDCNKI RMALIARLIA QIDAGNDVAA ILREHISVDH REFKGHELVL HVLYHLDSMA NLDTDESSSY ATVYENFLIA
0801: VARSFLDTLP PFDKSFSRLF GEAPHLPDSA IKLLNELCST RPDPVGGEAC DSERVTQGLG VVWSLILVRP NERKACLAIA LNCSVHYEED IRAKAIRLVT
0901: NKLYHLTYIS EHVEQFATDR LLTAVNSETD FSQTAEGTNI EAKSQITSTS DSPRSGNSDI HSQQDLQTSR DVSVLSFSEA QRLISLFFAL CKKKPSLLRL
1001: VFEVYGKAPK TVIQAFHRHM PILIRELGSS YIELLPIISD PPKGSENLLT LVLQILTQEL APSLDLIATV KHLYETKLKD VSILIPLLSS LTKDEVLPIF
1101: PPLLNLPPDK FQLALAHILQ GSAHTGPALT PAEVLIAIHE VVPDKDGPTL KKITDACSAC FEQRTVFTQQ VLAKALGQMV DRTPLPLLFM RTVIQAIDAF
1201: PTLVDFVMGI LSKLVSRQIW RLPKLWPGFL KCVSQTQPHS FPVLLELPMP QLESIMKKFP DLRPSLTAYA NQPTIRASLP NSALSVLGLD SGQDSRPQMH
1301: PSDAASSVHG AALT
0101: KNAISVGTAF YCTILEEMAM QFHHRGKVYR WVGELWTWMV KFKDAVFSTA LEPGCVGVKV LALKFMETFI LLFTPDASDP EKIFNEGSRK MFNISWLVGG
0201: HPILNSAMLM SEANRTFGIL LDLIHSAGRL PGALTITVVS CLAVVARKRP VHYNSFLSVL LDFHPNLESV KGCHAASVQY SIRTALLGFL RCTSSPMIES
0301: RDKLLRALRA MNAADVANQV LRQVDKLIRN NERAARENWS GKNNQAINHQ NSWDLSKKRI MPQGEDDTVN GEVAPKRLRH NNNMHLTPKG QISDSPHGTV
0401: SINGISSGNH PSDSEPTPVE QMVSMIGALL AEGDRGASSL EILISKLHPD MLADIVITSM KHLPSNPPTL TTSLATPADI VVSSSINPMR SPTRQPQLPF
0501: DSTLPFGSSL SDVPSLNAVV DPRRDPRRDP RRMDPRRSNP SVGPTSLPGD EGKETVPVQM DISTVASKPP SVPDVTAGTG GSVHPTTVDH SQNKVMGSSI
0601: IRRIDQPDCR EDLLPIPKEY GYLSKGKSPL DVPLSPCRDD EGIRNTKLDL DLVSVPDFNQ HSPSEAGPDF ELHPPVDSNI TAAEESYREL APVPSYVELT
0701: TEQSNTVGKL ALQRIIESNR HVCGFDCNKI RMALIARLIA QIDAGNDVAA ILREHISVDH REFKGHELVL HVLYHLDSMA NLDTDESSSY ATVYENFLIA
0801: VARSFLDTLP PFDKSFSRLF GEAPHLPDSA IKLLNELCST RPDPVGGEAC DSERVTQGLG VVWSLILVRP NERKACLAIA LNCSVHYEED IRAKAIRLVT
0901: NKLYHLTYIS EHVEQFATDR LLTAVNSETD FSQTAEGTNI EAKSQITSTS DSPRSGNSDI HSQQDLQTSR DVSVLSFSEA QRLISLFFAL CKKKPSLLRL
1001: VFEVYGKAPK TVIQAFHRHM PILIRELGSS YIELLPIISD PPKGSENLLT LVLQILTQEL APSLDLIATV KHLYETKLKD VSILIPLLSS LTKDEVLPIF
1101: PPLLNLPPDK FQLALAHILQ GSAHTGPALT PAEVLIAIHE VVPDKDGPTL KKITDACSAC FEQRTVFTQQ VLAKALGQMV DRTPLPLLFM RTVIQAIDAF
1201: PTLVDFVMGI LSKLVSRQIW RLPKLWPGFL KCVSQTQPHS FPVLLELPMP QLESIMKKFP DLRPSLTAYA NQPTIRASLP NSALSVLGLD SGQDSRPQMH
1301: PSDAASSVHG AALT
0001: MAAPAAATAR AQALSLLAAA NNHGDLAVKL SSLRQVKEIL LSLEPSLSAE IFPYLAELHL SREILVRKSL IEIIEEVGLR MLDHSYVLVS VLLVLSRDED
0101: PTVAKKSISV GTTFFCTILE EMAMQFHHRG KVDRWCGELW TWMVKFKDTV FATALEPGCV GVKVLALKFM ETFILLFTPD ASDPEKASSE GSRHMFNISW
0201: LAGGHPILNP ATLMSEANRT FGILVDFIQS ANRLPGALTI SVISCLAVVA RKRPVHYNTV LSVLLEFHPN LETVKGCHAA SVQYSIRTAF LGFLRCTFSP
0301: IIESRDKLLR AFRAMNAADV ADQVLRQVDK LVRNNERAAR ENWSGKNNQV ISHQNSWDLS KKRIMPQGED DTINGEVAPK RVRHNTNMHL TQQVQTNESL
0401: QGPVSINGIS SGNHLSDSEL TPVEQMVSMI GALLAEGDRG AASLEILISK LHPDMLADIV ITSMKHLPST PPTLASSVAT PADIVVSSST NTVHSPTPPA
0501: QLPFDPILPA GSSFSEVPSL SSSVADPRRD PRRDPRRMDP RRLNSSVGPT SLPVGEGKES VPVQKDISTL LSKPVSVSAV TPGATGSVHS TAVELSQNKM
0601: MGSSGIRIID PPECREDLLT VPNECSYPSK EISSLDVPLS PCRDDEGIRE TKYSVPDLDM LSVPDFDQHS PSASVPDFDQ DPPAASDITA PEESYRELDP
0701: VPSYVELTTE QSKTVGKLAI ERIIESNRHV FGFDCNKIRM ALIARLIARI DAGSDVATIL RELISVDHRE FKGHDLVLHV LYHLHSMAIL DTDESSFYAT
0801: VYENFLISVA RSFLDALPAS DKSFSRLFGE APHLPDSAIN LLDELCSTRH DPVGKEVCDS ERVTQGLGAV WSLILVRPNE RKACLAIALK CSVHSEEEVR
0901: AKAIRLVTNK LYHLTYIAEH VEQFATDMLL TAVNSETNLS QTASTAEGIK MEAKSQITLT TESLGSGNSD IPSQQDLQTS REVSVISISE AQRLISLFFA
1001: LCKKKPSLLR LVFEVYGRAP KMVNQAFHRH IPILIRELGS SYTELLQIIS DPPKGSENLL TYVLQILTQE LAPSLDLIAT VKHLYETKLK DVSILIPLLS
1101: SLTKDEVLPI FPPLLNLPPE KFQLALAHIL QGSAHTGPAL TPAEVLIAIH DIVPEKDGPP LKKITDACSA CFEQRTVFTQ QVLAKALGQM VDRTPLPLLF
1201: MRTVIQAIDA FPTLVDFVME ILSKLVRKQI WRLPKLWPGF LKCVSQTKPH SFPVLLELPV PQLESIMKKF PDLRPSLTAY ANQPTIRSSL PNSALSVLGL
1301: DNGQDSRSQM HPSDATSSIH GAALT
0101: PTVAKKSISV GTTFFCTILE EMAMQFHHRG KVDRWCGELW TWMVKFKDTV FATALEPGCV GVKVLALKFM ETFILLFTPD ASDPEKASSE GSRHMFNISW
0201: LAGGHPILNP ATLMSEANRT FGILVDFIQS ANRLPGALTI SVISCLAVVA RKRPVHYNTV LSVLLEFHPN LETVKGCHAA SVQYSIRTAF LGFLRCTFSP
0301: IIESRDKLLR AFRAMNAADV ADQVLRQVDK LVRNNERAAR ENWSGKNNQV ISHQNSWDLS KKRIMPQGED DTINGEVAPK RVRHNTNMHL TQQVQTNESL
0401: QGPVSINGIS SGNHLSDSEL TPVEQMVSMI GALLAEGDRG AASLEILISK LHPDMLADIV ITSMKHLPST PPTLASSVAT PADIVVSSST NTVHSPTPPA
0501: QLPFDPILPA GSSFSEVPSL SSSVADPRRD PRRDPRRMDP RRLNSSVGPT SLPVGEGKES VPVQKDISTL LSKPVSVSAV TPGATGSVHS TAVELSQNKM
0601: MGSSGIRIID PPECREDLLT VPNECSYPSK EISSLDVPLS PCRDDEGIRE TKYSVPDLDM LSVPDFDQHS PSASVPDFDQ DPPAASDITA PEESYRELDP
0701: VPSYVELTTE QSKTVGKLAI ERIIESNRHV FGFDCNKIRM ALIARLIARI DAGSDVATIL RELISVDHRE FKGHDLVLHV LYHLHSMAIL DTDESSFYAT
0801: VYENFLISVA RSFLDALPAS DKSFSRLFGE APHLPDSAIN LLDELCSTRH DPVGKEVCDS ERVTQGLGAV WSLILVRPNE RKACLAIALK CSVHSEEEVR
0901: AKAIRLVTNK LYHLTYIAEH VEQFATDMLL TAVNSETNLS QTASTAEGIK MEAKSQITLT TESLGSGNSD IPSQQDLQTS REVSVISISE AQRLISLFFA
1001: LCKKKPSLLR LVFEVYGRAP KMVNQAFHRH IPILIRELGS SYTELLQIIS DPPKGSENLL TYVLQILTQE LAPSLDLIAT VKHLYETKLK DVSILIPLLS
1101: SLTKDEVLPI FPPLLNLPPE KFQLALAHIL QGSAHTGPAL TPAEVLIAIH DIVPEKDGPP LKKITDACSA CFEQRTVFTQ QVLAKALGQM VDRTPLPLLF
1201: MRTVIQAIDA FPTLVDFVME ILSKLVRKQI WRLPKLWPGF LKCVSQTKPH SFPVLLELPV PQLESIMKKF PDLRPSLTAY ANQPTIRSSL PNSALSVLGL
1301: DNGQDSRSQM HPSDATSSIH GAALT
Arabidopsis Description
CONTAINS InterPro DOMAIN/s: Symplekin tight junction protein C-terminal (InterPro:IPR022075); BEST Arabidopsis thaliana protein match is: HEAT repeat-containing protein (TAIR:AT5G01400.1); Has 593 Blast hits to 297 proteins in 111 species: Archae - /.../teria - 3; Metazoa - 139; Fungi - 49; Plants - 57; Viruses - 0; Other Eukaryotes - 345 (source: NCBI BLink). [Source:TAIR;Acc:AT1G27595]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.