Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH62152 | Soybean | plasma membrane | 90.55 | 90.62 |
| VIT_18s0001g08130.t01 | Wine grape | extracellular, plasma membrane, plastid | 11.98 | 66.53 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, plasma membrane | 8.56 | 64.97 |
| CDY11784 | Canola | cytosol | 11.16 | 62.5 |
| Os01t0694300-01 | Rice | extracellular, peroxisome | 6.25 | 59.57 |
| VIT_18s0001g08140.t01 | Wine grape | mitochondrion | 47.17 | 59.42 |
| AT1G27595.1 | Thale cress | nucleus | 52.98 | 53.74 |
| Bra010931.1-P | Field mustard | plastid | 52.23 | 53.14 |
| CDX84921 | Canola | plastid | 51.93 | 53.12 |
| CDY27621 | Canola | plasma membrane, plastid | 51.41 | 53.07 |
| Solyc04g076910.2.1 | Tomato | nucleus | 44.79 | 52.35 |
| CDX90095 | Canola | plastid | 51.86 | 51.86 |
| CDY11788 | Canola | plastid | 51.93 | 51.47 |
| Bra032834.1-P | Field mustard | plasma membrane, plastid | 51.12 | 51.04 |
| GSMUA_AchrUn_... | Banana | cytosol | 8.71 | 50.65 |
| HORVU6Hr1G076280.1 | Barley | cytosol | 6.32 | 47.22 |
| HORVU3Hr1G064850.4 | Barley | extracellular, plasma membrane | 34.75 | 42.8 |
| TraesCS3B01G292200.1 | Wheat | cytosol | 40.77 | 42.38 |
| TraesCS3A01G259200.1 | Wheat | cytosol | 40.4 | 42.16 |
| TraesCS3D01G259300.1 | Wheat | cytosol | 40.48 | 42.07 |
| KXG31070 | Sorghum | plastid | 38.69 | 41.17 |
| HORVU6Hr1G076270.4 | Barley | cytosol | 3.72 | 40.65 |
| OQU87378 | Sorghum | cytosol, plasma membrane | 37.72 | 39.92 |
| GSMUA_Achr8P31930_001 | Banana | extracellular, plasma membrane | 23.29 | 39.08 |
| Zm00001d043775_P006 | Maize | cytosol | 38.47 | 38.61 |
| KRG88461 | Soybean | cytosol | 5.51 | 36.63 |
| KRH65727 | Soybean | cytosol | 36.24 | 35.89 |
| KRH75969 | Soybean | cytosol | 35.79 | 35.37 |
Protein Annotations
| Gene3D:1.25.10.10 | EntrezGene:100810420 | MapMan:16.2.1.2.9 | EMBL:ACUP02003439 | InterPro:ARM-like | InterPro:ARM-type_fold |
| EnsemblPlantsGene:GLYMA_06G091300 | GO:GO:0003674 | GO:GO:0005488 | InterPro:IPR011989 | UniProt:K7KU37 | EnsemblPlants:KRH52859 |
| ProteinID:KRH52859 | ProteinID:KRH52859.1 | PFAM:PF11935 | PFAM:PF12295 | PANTHER:PTHR15245 | PANTHER:PTHR15245:SF20 |
| SUPFAM:SSF48371 | InterPro:Symplekin/Pta1 | InterPro:Symplekin/Pta1_N | InterPro:Symplekin_C | UniParc:UPI000294DD8D | SEG:seg |
Description
hypothetical protein
Coordinates
chr6:-:7145496..7169887
Molecular Weight (calculated)
147316.0 Da
IEP (calculated)
5.783
GRAVY (calculated)
-0.013
Length
1344 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAPTRDQVL SLLAAANNHG DLAVKTSSLK QAKDLLLSID PSLAADLFPY LLELQSSPES LVRKLLIQII EEIGFKAAEQ SPTLISVLLT FLRDNDEIVV
0101: KQSIVSGTNI FCSIFEELIV QFQQYGKVER WLEDIWVWML KFKDAVFGIA LEPGSVGIKL LALKFLEMFV LLFSSDFNDA EKLAAKGIRQ AVNVSWLVGH
0201: PHPVLDPVVL MSDANRTIGI LLNLLQSVGS LPGCLTIAVV NCLAAITRKR PQHYETILSA LLDFDPNFQT VKGCHVTSIQ YSLRTAFLGF LRCTYSPILE
0301: SRERLIRSLR AMNAGDAADQ VIRQVDKMIK NGDRSTRDAR VSKDDQPSAQ SPVSGELSRK RPVPLDNEQL ANGHDTISKR IRSGSGSDSH STLPTQINDS
0401: GQDVNSVNGV SANVPVLDSE LTAVEQMIAV IGALLAEGER GAESLEILIS KIHPDLLADI VITNMKHLPN TPPPLARIGN LPVTRQLSSQ VSQSQVIAAS
0501: VPINSVQSLS GTAQASFPST STTVTATATT SLPSDTSSFS NQPADSKRDP RRDPRRLDPR RVVVTPGEAT ASIADDTGAT KLVFDEPVSS IKPVSLPVGT
0601: ADDNTPSDLT VKIINDDIVS EGSPVSGPDR LTPKTEDLER LGDIHQITEA DTSLDLPLSS TYLRDEDPST VKLPDDTETI GTDSSIFEFD QFSLDVQVES
0701: TLEDTCLELP QLPPYIELSK EQESKVKNMA VMRIIDSYKH LHGTDCQQFS MPLLARLVAQ IDDNDEFIMM LQKHILEDHW RKGHELVLHV LYHLHSLMIV
0801: DSVGNASSSA VLYEKFLLGV AKTLLDSFPA SDKSFSRLLG EVPLLPESSL KILNDLCYSD VIGHDGKIIR DIERVTQGLG AIWSLILGRP QNRQACLGIA
0901: LKCAVHPQDD IRAKAIRLVT NKLFQLNYIS GDVEKFATKM LLSAVEHEVS DTGLLQSGHT EQRAEAEIES HEISTSQVES TISEIDSAIV AKPSIQSVPS
1001: ISFSEAQRLI SLFFALCTKK SGLLQIVFSV YGQAPKTVKQ AFHRHIPIVV RALGQSYSEL LRIISDPPQG SENLLTLVLQ ILTQDTTPSS DLISTVKRLY
1101: ETKFKDVTIL VPLLSSLSKQ EVLPIFPRLV DLPLEKFQRA LAHILQGSAH TGPALTPVEV LVAIHGIVPE KDGLALKKIT DACSACFEQR TVFTQQVLAK
1201: ALNQMVDQTP LPLLFMRTVI QAIDAFPALV DFVMEILSKL VSRQVWRMPK LWVGFLKCVY QTQPRSFHVL LQLPPQQLES ALNRHANLRG PLASYASQPT
1301: VKSSLSRSTL AVLGLANETH VQQHLSSSLH SSDTSSSLHE ATLT
0101: KQSIVSGTNI FCSIFEELIV QFQQYGKVER WLEDIWVWML KFKDAVFGIA LEPGSVGIKL LALKFLEMFV LLFSSDFNDA EKLAAKGIRQ AVNVSWLVGH
0201: PHPVLDPVVL MSDANRTIGI LLNLLQSVGS LPGCLTIAVV NCLAAITRKR PQHYETILSA LLDFDPNFQT VKGCHVTSIQ YSLRTAFLGF LRCTYSPILE
0301: SRERLIRSLR AMNAGDAADQ VIRQVDKMIK NGDRSTRDAR VSKDDQPSAQ SPVSGELSRK RPVPLDNEQL ANGHDTISKR IRSGSGSDSH STLPTQINDS
0401: GQDVNSVNGV SANVPVLDSE LTAVEQMIAV IGALLAEGER GAESLEILIS KIHPDLLADI VITNMKHLPN TPPPLARIGN LPVTRQLSSQ VSQSQVIAAS
0501: VPINSVQSLS GTAQASFPST STTVTATATT SLPSDTSSFS NQPADSKRDP RRDPRRLDPR RVVVTPGEAT ASIADDTGAT KLVFDEPVSS IKPVSLPVGT
0601: ADDNTPSDLT VKIINDDIVS EGSPVSGPDR LTPKTEDLER LGDIHQITEA DTSLDLPLSS TYLRDEDPST VKLPDDTETI GTDSSIFEFD QFSLDVQVES
0701: TLEDTCLELP QLPPYIELSK EQESKVKNMA VMRIIDSYKH LHGTDCQQFS MPLLARLVAQ IDDNDEFIMM LQKHILEDHW RKGHELVLHV LYHLHSLMIV
0801: DSVGNASSSA VLYEKFLLGV AKTLLDSFPA SDKSFSRLLG EVPLLPESSL KILNDLCYSD VIGHDGKIIR DIERVTQGLG AIWSLILGRP QNRQACLGIA
0901: LKCAVHPQDD IRAKAIRLVT NKLFQLNYIS GDVEKFATKM LLSAVEHEVS DTGLLQSGHT EQRAEAEIES HEISTSQVES TISEIDSAIV AKPSIQSVPS
1001: ISFSEAQRLI SLFFALCTKK SGLLQIVFSV YGQAPKTVKQ AFHRHIPIVV RALGQSYSEL LRIISDPPQG SENLLTLVLQ ILTQDTTPSS DLISTVKRLY
1101: ETKFKDVTIL VPLLSSLSKQ EVLPIFPRLV DLPLEKFQRA LAHILQGSAH TGPALTPVEV LVAIHGIVPE KDGLALKKIT DACSACFEQR TVFTQQVLAK
1201: ALNQMVDQTP LPLLFMRTVI QAIDAFPALV DFVMEILSKL VSRQVWRMPK LWVGFLKCVY QTQPRSFHVL LQLPPQQLES ALNRHANLRG PLASYASQPT
1301: VKSSLSRSTL AVLGLANETH VQQHLSSSLH SSDTSSSLHE ATLT
0001: MAAPAAATAR AQALSLLAAA NNHGDLAVKL SSLRQVKEIL LSLEPSLSAE IFPYLAELHL SREILVRKSL IEIIEEVGLR MLDHSYVLVS VLLVLSRDED
0101: PTVAKKSISV GTTFFCTILE EMAMQFHHRG KVDRWCGELW TWMVKFKDTV FATALEPGCV GVKVLALKFM ETFILLFTPD ASDPEKASSE GSRHMFNISW
0201: LAGGHPILNP ATLMSEANRT FGILVDFIQS ANRLPGALTI SVISCLAVVA RKRPVHYNTV LSVLLEFHPN LETVKGCHAA SVQYSIRTAF LGFLRCTFSP
0301: IIESRDKLLR AFRAMNAADV ADQVLRQVDK LVRNNERAAR ENWSGKNNQV ISHQNSWDLS KKRIMPQGED DTINGEVAPK RVRHNTNMHL TQQVQTNESL
0401: QGPVSINGIS SGNHLSDSEL TPVEQMVSMI GALLAEGDRG AASLEILISK LHPDMLADIV ITSMKHLPST PPTLASSVAT PADIVVSSST NTVHSPTPPA
0501: QLPFDPILPA GSSFSEVPSL SSSVADPRRD PRRDPRRMDP RRLNSSVGPT SLPVGEGKES VPVQKDISTL LSKPVSVSAV TPGATGSVHS TAVELSQNKM
0601: MGSSGIRIID PPECREDLLT VPNECSYPSK EISSLDVPLS PCRDDEGIRE TKYSVPDLDM LSVPDFDQHS PSASVPDFDQ DPPAASDITA PEESYRELDP
0701: VPSYVELTTE QSKTVGKLAI ERIIESNRHV FGFDCNKIRM ALIARLIARI DAGSDVATIL RELISVDHRE FKGHDLVLHV LYHLHSMAIL DTDESSFYAT
0801: VYENFLISVA RSFLDALPAS DKSFSRLFGE APHLPDSAIN LLDELCSTRH DPVGKEVCDS ERVTQGLGAV WSLILVRPNE RKACLAIALK CSVHSEEEVR
0901: AKAIRLVTNK LYHLTYIAEH VEQFATDMLL TAVNSETNLS QTASTAEGIK MEAKSQITLT TESLGSGNSD IPSQQDLQTS REVSVISISE AQRLISLFFA
1001: LCKKKPSLLR LVFEVYGRAP KMVNQAFHRH IPILIRELGS SYTELLQIIS DPPKGSENLL TYVLQILTQE LAPSLDLIAT VKHLYETKLK DVSILIPLLS
1101: SLTKDEVLPI FPPLLNLPPE KFQLALAHIL QGSAHTGPAL TPAEVLIAIH DIVPEKDGPP LKKITDACSA CFEQRTVFTQ QVLAKALGQM VDRTPLPLLF
1201: MRTVIQAIDA FPTLVDFVME ILSKLVRKQI WRLPKLWPGF LKCVSQTKPH SFPVLLELPV PQLESIMKKF PDLRPSLTAY ANQPTIRSSL PNSALSVLGL
1301: DNGQDSRSQM HPSDATSSIH GAALT
0101: PTVAKKSISV GTTFFCTILE EMAMQFHHRG KVDRWCGELW TWMVKFKDTV FATALEPGCV GVKVLALKFM ETFILLFTPD ASDPEKASSE GSRHMFNISW
0201: LAGGHPILNP ATLMSEANRT FGILVDFIQS ANRLPGALTI SVISCLAVVA RKRPVHYNTV LSVLLEFHPN LETVKGCHAA SVQYSIRTAF LGFLRCTFSP
0301: IIESRDKLLR AFRAMNAADV ADQVLRQVDK LVRNNERAAR ENWSGKNNQV ISHQNSWDLS KKRIMPQGED DTINGEVAPK RVRHNTNMHL TQQVQTNESL
0401: QGPVSINGIS SGNHLSDSEL TPVEQMVSMI GALLAEGDRG AASLEILISK LHPDMLADIV ITSMKHLPST PPTLASSVAT PADIVVSSST NTVHSPTPPA
0501: QLPFDPILPA GSSFSEVPSL SSSVADPRRD PRRDPRRMDP RRLNSSVGPT SLPVGEGKES VPVQKDISTL LSKPVSVSAV TPGATGSVHS TAVELSQNKM
0601: MGSSGIRIID PPECREDLLT VPNECSYPSK EISSLDVPLS PCRDDEGIRE TKYSVPDLDM LSVPDFDQHS PSASVPDFDQ DPPAASDITA PEESYRELDP
0701: VPSYVELTTE QSKTVGKLAI ERIIESNRHV FGFDCNKIRM ALIARLIARI DAGSDVATIL RELISVDHRE FKGHDLVLHV LYHLHSMAIL DTDESSFYAT
0801: VYENFLISVA RSFLDALPAS DKSFSRLFGE APHLPDSAIN LLDELCSTRH DPVGKEVCDS ERVTQGLGAV WSLILVRPNE RKACLAIALK CSVHSEEEVR
0901: AKAIRLVTNK LYHLTYIAEH VEQFATDMLL TAVNSETNLS QTASTAEGIK MEAKSQITLT TESLGSGNSD IPSQQDLQTS REVSVISISE AQRLISLFFA
1001: LCKKKPSLLR LVFEVYGRAP KMVNQAFHRH IPILIRELGS SYTELLQIIS DPPKGSENLL TYVLQILTQE LAPSLDLIAT VKHLYETKLK DVSILIPLLS
1101: SLTKDEVLPI FPPLLNLPPE KFQLALAHIL QGSAHTGPAL TPAEVLIAIH DIVPEKDGPP LKKITDACSA CFEQRTVFTQ QVLAKALGQM VDRTPLPLLF
1201: MRTVIQAIDA FPTLVDFVME ILSKLVRKQI WRLPKLWPGF LKCVSQTKPH SFPVLLELPV PQLESIMKKF PDLRPSLTAY ANQPTIRSSL PNSALSVLGL
1301: DNGQDSRSQM HPSDATSSIH GAALT
Arabidopsis Description
CONTAINS InterPro DOMAIN/s: Symplekin tight junction protein C-terminal (InterPro:IPR022075); BEST Arabidopsis thaliana protein match is: HEAT repeat-containing protein (TAIR:AT5G01400.1); Has 593 Blast hits to 297 proteins in 111 species: Archae - /.../teria - 3; Metazoa - 139; Fungi - 49; Plants - 57; Viruses - 0; Other Eukaryotes - 345 (source: NCBI BLink). [Source:TAIR;Acc:AT1G27595]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.