Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 2
- cytosol 1
- nucleus 1
- plasma membrane 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90095 | Canola | plastid | 96.14 | 94.49 |
| AT1G27595.1 | Thale cress | nucleus | 83.72 | 83.47 |
| Bra032834.1-P | Field mustard | plasma membrane, plastid | 83.5 | 81.95 |
| VIT_18s0001g08130.t01 | Wine grape | extracellular, plasma membrane, plastid | 10.9 | 59.5 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, plasma membrane | 7.87 | 58.76 |
| KRH52859 | Soybean | nucleus | 53.14 | 52.23 |
| Os01t0694300-01 | Rice | extracellular, peroxisome | 5.53 | 51.77 |
| KRH62152 | Soybean | plasma membrane | 52.61 | 51.75 |
| GSMUA_AchrUn_... | Banana | cytosol | 8.93 | 51.08 |
| VIT_18s0001g08140.t01 | Wine grape | mitochondrion | 41.18 | 50.98 |
| HORVU6Hr1G076280.1 | Barley | cytosol | 6.59 | 48.33 |
| Solyc04g076910.2.1 | Tomato | nucleus | 39.67 | 45.57 |
| HORVU6Hr1G076270.4 | Barley | cytosol | 4.24 | 45.53 |
| HORVU3Hr1G064850.4 | Barley | extracellular, plasma membrane | 33.46 | 40.51 |
| TraesCS3A01G259200.1 | Wheat | cytosol | 38.76 | 39.75 |
| TraesCS3B01G292200.1 | Wheat | cytosol | 38.83 | 39.68 |
| TraesCS3D01G259300.1 | Wheat | cytosol | 38.83 | 39.68 |
| KXG31070 | Sorghum | plastid | 36.94 | 38.64 |
| OQU87378 | Sorghum | cytosol, plasma membrane | 36.41 | 37.87 |
| Zm00001d043775_P006 | Maize | cytosol | 37.17 | 36.67 |
| GSMUA_Achr8P31930_001 | Banana | extracellular, plasma membrane | 19.61 | 32.33 |
| Bra028900.1-P | Field mustard | plastid | 32.48 | 28.32 |
Protein Annotations
| EnsemblPlants:Bra010931.1 | EnsemblPlants:Bra010931.1-P | EnsemblPlantsGene:Bra010931 | Gene3D:1.25.10.10 | GO:GO:0003674 | GO:GO:0005488 |
| InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:IPR011989 | InterPro:Symplekin/Pta1_N | InterPro:Symplekin_C | ncoils:Coil |
| PANTHER:PTHR15245 | PANTHER:PTHR15245:SF35 | PFAM:PF11935 | PFAM:PF12295 | SEG:seg | SUPFAM:SSF48371 |
| UniParc:UPI0002545A59 | UniProt:M4D378 | MapMan:16.2.1.2.9 | : | : | : |
Description
AT1G27595 (E=0.0) | EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: ESP4 (ENHANCED SILENCING PHENOTYPE 4); binding (TAIR:AT5G01400.1); Has 529 Blast hits to 235 proteins in 85 species: Archae - 0; Bacteria - 3; Metazoa - 125; Fungi - 41; Plants - 31; Viruses - 0; Other Eukaryotes - 329 (source: NCBI BLink).
Coordinates
chrA08:-:17180453..17190802
Molecular Weight (calculated)
144777.0 Da
IEP (calculated)
6.631
GRAVY (calculated)
-0.104
Length
1321 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAATARTQA LSLLAAANNH GDLAVKLSSL RQVKEILLSL DPSLSAEIFP YLTELHSSRE ILVRKSLLEI IEEVGLRMMD HSYALVTVLL VLARDEDPIV
0101: AKKAVSVGTA FYCSILEEMA MQFHHRGKVD RWVGELWTWM VKFKDVVFST ALEPGSVGVK VLALKFMETF ILLFTPDASD PENFSNEGSR QMFNISWLAG
0201: GHPILNSVTL MSEANRTFGI LQDLVQSAGR LPGALTVAVV SCLAVVARKR PVHYNTVLSV LLDFHPNLVT VKGCHAASVQ YSIRTALLGF LRCTSSPMIE
0301: SRDKLLRALR AMNASDVADQ AVRQVDKLIR NNERFARENW SGKSNQAISH PNSWDLSKKR KMSQGEDDTI NGEAAPKRLR HNTNMHLTPQ VKISDSPHGP
0401: VSINGISPAN HPSDSEPTPV EQMVSMIGAL LAEGDRGAAS LDILISQLHP DMLADIVITS MKHLPSSPPT LTTSLATPAD IVDSMRSPTL QPQVPFDPTL
0501: PAGLSVSDVP SLNSAVADPR RDPRRDPRRI DPRRSNSSVA PTSLPVSEGK EPIPVQMDIS SLPSDPLSVP AVTAGDSGSV HPTTIEHSQN KVVGSSVIRL
0601: IDQPDCREDL LTAPSERVYP SKGKSSLDVP LSPCRDDRGI RETKFSGSET KCRDDLASIP DFDQHSPLES GPDFDLQPPA ASDATAEEES YRELASVPSY
0701: VELTTEQSKT VGKLALERII ESNRHVCGFD CNKIRMPLIA RLIAKIGAGN DVVAILREHI SVDHREFKGH ELVLHVLYHL HSMANLDTDE TSSYSAVYEN
0801: FLITVARSFL DALPASDKSF SRLFGEAPHL PDSAIKLLDE LCSTRHDPTG REISDSERVT QGLGAVWSLI LVRPNERKEF LAIALNCSVH SEEDIRAKAI
0901: RLVTNKLYHL TYTSEHVEKF ATDMLLTAVN SEADLSQTGF IAEGIKTEAK SQITSTSDSP SSRTSDTHSQ QGLQTSRDAS VLSFAEAQRL ISLFFALCKK
1001: KPSLLRLVFE VYGKAPKTVI QAFHRHIPIL IRELGSSYKE LLHIISDPPK GSENLLTLVL QILTQELAPS SDLITTVKHL YETKLKDVSI LIPLLSSLSK
1101: DEVLPIFPPL LNLPPEKFQL ALAHILQGSA HTGPALTPAE VLIAIHDVVP EKNGPPLKKI TDACSACFEQ RTVFTQQVLA KALGQMVDRT PLPLLFMRTV
1201: IQAIDAFPTL VDVVMEILSK LVSRQIWRLP KLWPGFLKCV SQTQPHSFPV LLELPMPQLE SIMKKFPDLR PSLTAYANQP AIRASLPNSA LSVLGLENGQ
1301: DSRSQMHPSD AASSIHGAAL T
0101: AKKAVSVGTA FYCSILEEMA MQFHHRGKVD RWVGELWTWM VKFKDVVFST ALEPGSVGVK VLALKFMETF ILLFTPDASD PENFSNEGSR QMFNISWLAG
0201: GHPILNSVTL MSEANRTFGI LQDLVQSAGR LPGALTVAVV SCLAVVARKR PVHYNTVLSV LLDFHPNLVT VKGCHAASVQ YSIRTALLGF LRCTSSPMIE
0301: SRDKLLRALR AMNASDVADQ AVRQVDKLIR NNERFARENW SGKSNQAISH PNSWDLSKKR KMSQGEDDTI NGEAAPKRLR HNTNMHLTPQ VKISDSPHGP
0401: VSINGISPAN HPSDSEPTPV EQMVSMIGAL LAEGDRGAAS LDILISQLHP DMLADIVITS MKHLPSSPPT LTTSLATPAD IVDSMRSPTL QPQVPFDPTL
0501: PAGLSVSDVP SLNSAVADPR RDPRRDPRRI DPRRSNSSVA PTSLPVSEGK EPIPVQMDIS SLPSDPLSVP AVTAGDSGSV HPTTIEHSQN KVVGSSVIRL
0601: IDQPDCREDL LTAPSERVYP SKGKSSLDVP LSPCRDDRGI RETKFSGSET KCRDDLASIP DFDQHSPLES GPDFDLQPPA ASDATAEEES YRELASVPSY
0701: VELTTEQSKT VGKLALERII ESNRHVCGFD CNKIRMPLIA RLIAKIGAGN DVVAILREHI SVDHREFKGH ELVLHVLYHL HSMANLDTDE TSSYSAVYEN
0801: FLITVARSFL DALPASDKSF SRLFGEAPHL PDSAIKLLDE LCSTRHDPTG REISDSERVT QGLGAVWSLI LVRPNERKEF LAIALNCSVH SEEDIRAKAI
0901: RLVTNKLYHL TYTSEHVEKF ATDMLLTAVN SEADLSQTGF IAEGIKTEAK SQITSTSDSP SSRTSDTHSQ QGLQTSRDAS VLSFAEAQRL ISLFFALCKK
1001: KPSLLRLVFE VYGKAPKTVI QAFHRHIPIL IRELGSSYKE LLHIISDPPK GSENLLTLVL QILTQELAPS SDLITTVKHL YETKLKDVSI LIPLLSSLSK
1101: DEVLPIFPPL LNLPPEKFQL ALAHILQGSA HTGPALTPAE VLIAIHDVVP EKNGPPLKKI TDACSACFEQ RTVFTQQVLA KALGQMVDRT PLPLLFMRTV
1201: IQAIDAFPTL VDVVMEILSK LVSRQIWRLP KLWPGFLKCV SQTQPHSFPV LLELPMPQLE SIMKKFPDLR PSLTAYANQP AIRASLPNSA LSVLGLENGQ
1301: DSRSQMHPSD AASSIHGAAL T
0001: MAAPAAATAR AQALSLLAAA NNHGDLAVKL SSLRQVKEIL LSLEPSLSAE IFPYLAELHL SREILVRKSL IEIIEEVGLR MLDHSYVLVS VLLVLSRDED
0101: PTVAKKSISV GTTFFCTILE EMAMQFHHRG KVDRWCGELW TWMVKFKDTV FATALEPGCV GVKVLALKFM ETFILLFTPD ASDPEKASSE GSRHMFNISW
0201: LAGGHPILNP ATLMSEANRT FGILVDFIQS ANRLPGALTI SVISCLAVVA RKRPVHYNTV LSVLLEFHPN LETVKGCHAA SVQYSIRTAF LGFLRCTFSP
0301: IIESRDKLLR AFRAMNAADV ADQVLRQVDK LVRNNERAAR ENWSGKNNQV ISHQNSWDLS KKRIMPQGED DTINGEVAPK RVRHNTNMHL TQQVQTNESL
0401: QGPVSINGIS SGNHLSDSEL TPVEQMVSMI GALLAEGDRG AASLEILISK LHPDMLADIV ITSMKHLPST PPTLASSVAT PADIVVSSST NTVHSPTPPA
0501: QLPFDPILPA GSSFSEVPSL SSSVADPRRD PRRDPRRMDP RRLNSSVGPT SLPVGEGKES VPVQKDISTL LSKPVSVSAV TPGATGSVHS TAVELSQNKM
0601: MGSSGIRIID PPECREDLLT VPNECSYPSK EISSLDVPLS PCRDDEGIRE TKYSVPDLDM LSVPDFDQHS PSASVPDFDQ DPPAASDITA PEESYRELDP
0701: VPSYVELTTE QSKTVGKLAI ERIIESNRHV FGFDCNKIRM ALIARLIARI DAGSDVATIL RELISVDHRE FKGHDLVLHV LYHLHSMAIL DTDESSFYAT
0801: VYENFLISVA RSFLDALPAS DKSFSRLFGE APHLPDSAIN LLDELCSTRH DPVGKEVCDS ERVTQGLGAV WSLILVRPNE RKACLAIALK CSVHSEEEVR
0901: AKAIRLVTNK LYHLTYIAEH VEQFATDMLL TAVNSETNLS QTASTAEGIK MEAKSQITLT TESLGSGNSD IPSQQDLQTS REVSVISISE AQRLISLFFA
1001: LCKKKPSLLR LVFEVYGRAP KMVNQAFHRH IPILIRELGS SYTELLQIIS DPPKGSENLL TYVLQILTQE LAPSLDLIAT VKHLYETKLK DVSILIPLLS
1101: SLTKDEVLPI FPPLLNLPPE KFQLALAHIL QGSAHTGPAL TPAEVLIAIH DIVPEKDGPP LKKITDACSA CFEQRTVFTQ QVLAKALGQM VDRTPLPLLF
1201: MRTVIQAIDA FPTLVDFVME ILSKLVRKQI WRLPKLWPGF LKCVSQTKPH SFPVLLELPV PQLESIMKKF PDLRPSLTAY ANQPTIRSSL PNSALSVLGL
1301: DNGQDSRSQM HPSDATSSIH GAALT
0101: PTVAKKSISV GTTFFCTILE EMAMQFHHRG KVDRWCGELW TWMVKFKDTV FATALEPGCV GVKVLALKFM ETFILLFTPD ASDPEKASSE GSRHMFNISW
0201: LAGGHPILNP ATLMSEANRT FGILVDFIQS ANRLPGALTI SVISCLAVVA RKRPVHYNTV LSVLLEFHPN LETVKGCHAA SVQYSIRTAF LGFLRCTFSP
0301: IIESRDKLLR AFRAMNAADV ADQVLRQVDK LVRNNERAAR ENWSGKNNQV ISHQNSWDLS KKRIMPQGED DTINGEVAPK RVRHNTNMHL TQQVQTNESL
0401: QGPVSINGIS SGNHLSDSEL TPVEQMVSMI GALLAEGDRG AASLEILISK LHPDMLADIV ITSMKHLPST PPTLASSVAT PADIVVSSST NTVHSPTPPA
0501: QLPFDPILPA GSSFSEVPSL SSSVADPRRD PRRDPRRMDP RRLNSSVGPT SLPVGEGKES VPVQKDISTL LSKPVSVSAV TPGATGSVHS TAVELSQNKM
0601: MGSSGIRIID PPECREDLLT VPNECSYPSK EISSLDVPLS PCRDDEGIRE TKYSVPDLDM LSVPDFDQHS PSASVPDFDQ DPPAASDITA PEESYRELDP
0701: VPSYVELTTE QSKTVGKLAI ERIIESNRHV FGFDCNKIRM ALIARLIARI DAGSDVATIL RELISVDHRE FKGHDLVLHV LYHLHSMAIL DTDESSFYAT
0801: VYENFLISVA RSFLDALPAS DKSFSRLFGE APHLPDSAIN LLDELCSTRH DPVGKEVCDS ERVTQGLGAV WSLILVRPNE RKACLAIALK CSVHSEEEVR
0901: AKAIRLVTNK LYHLTYIAEH VEQFATDMLL TAVNSETNLS QTASTAEGIK MEAKSQITLT TESLGSGNSD IPSQQDLQTS REVSVISISE AQRLISLFFA
1001: LCKKKPSLLR LVFEVYGRAP KMVNQAFHRH IPILIRELGS SYTELLQIIS DPPKGSENLL TYVLQILTQE LAPSLDLIAT VKHLYETKLK DVSILIPLLS
1101: SLTKDEVLPI FPPLLNLPPE KFQLALAHIL QGSAHTGPAL TPAEVLIAIH DIVPEKDGPP LKKITDACSA CFEQRTVFTQ QVLAKALGQM VDRTPLPLLF
1201: MRTVIQAIDA FPTLVDFVME ILSKLVRKQI WRLPKLWPGF LKCVSQTKPH SFPVLLELPV PQLESIMKKF PDLRPSLTAY ANQPTIRSSL PNSALSVLGL
1301: DNGQDSRSQM HPSDATSSIH GAALT
Arabidopsis Description
CONTAINS InterPro DOMAIN/s: Symplekin tight junction protein C-terminal (InterPro:IPR022075); BEST Arabidopsis thaliana protein match is: HEAT repeat-containing protein (TAIR:AT5G01400.1); Has 593 Blast hits to 297 proteins in 111 species: Archae - /.../teria - 3; Metazoa - 139; Fungi - 49; Plants - 57; Viruses - 0; Other Eukaryotes - 345 (source: NCBI BLink). [Source:TAIR;Acc:AT1G27595]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.