Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG31070 | Sorghum | plastid | 86.71 | 91.92 |
| OQU87378 | Sorghum | cytosol, plasma membrane | 85.66 | 90.31 |
| Os01t0694300-01 | Rice | extracellular, peroxisome | 8.59 | 81.56 |
| HORVU6Hr1G076280.1 | Barley | cytosol | 10.16 | 75.56 |
| TraesCS3D01G259300.1 | Wheat | cytosol | 69.53 | 72.0 |
| TraesCS3A01G259200.1 | Wheat | cytosol | 68.93 | 71.66 |
| TraesCS3B01G292200.1 | Wheat | cytosol | 69.16 | 71.62 |
| HORVU3Hr1G064850.4 | Barley | extracellular, plasma membrane | 56.24 | 69.02 |
| HORVU6Hr1G076270.4 | Barley | cytosol | 5.83 | 63.41 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, plasma membrane | 8.36 | 63.28 |
| GSMUA_AchrUn_... | Banana | cytosol | 8.74 | 50.65 |
| VIT_18s0001g08140.t01 | Wine grape | mitochondrion | 33.98 | 42.64 |
| Solyc04g076910.2.1 | Tomato | nucleus | 35.62 | 41.48 |
| KRH62152 | Soybean | plasma membrane | 38.84 | 38.72 |
| AT1G27595.1 | Thale cress | nucleus | 38.09 | 38.49 |
| KRH52859 | Soybean | nucleus | 38.61 | 38.47 |
| Bra010931.1-P | Field mustard | plastid | 36.67 | 37.17 |
| Bra032834.1-P | Field mustard | plasma membrane, plastid | 37.19 | 37.0 |
| CDY11783 | Canola | endoplasmic reticulum, plasma membrane | 4.33 | 35.8 |
| Solyc04g076900.1.1 | Tomato | nucleus | 5.83 | 31.58 |
| VIT_18s0001g08130.t01 | Wine grape | extracellular, plasma membrane, plastid | 5.6 | 30.99 |
| Zm00001d022586_P001 | Maize | cytosol | 28.9 | 30.09 |
Protein Annotations
| EnsemblPlants:Zm00001d043775_P006 | EnsemblPlants:Zm00001d043775_T006 | EnsemblPlantsGene:Zm00001d043775 | EntrezGene:103651305 | Gene3D:1.25.10.10 | InterPro:ARM-like |
| InterPro:IPR011989 | InterPro:Symplekin/Pta1 | InterPro:Symplekin/Pta1_N | InterPro:Symplekin_C | ncoils:Coil | PANTHER:PTHR15245 |
| PANTHER:PTHR15245:SF20 | PFAM:PF11935 | PFAM:PF12295 | ProteinID:ONM38989.1 | SEG:seg | UniParc:UPI000844EC80 |
| UniProt:A0A1D6NET2 | MapMan:16.2.1.2.9 | : | : | : | : |
Description
No Description!
Coordinates
chr3:+:209789777..209811322
Molecular Weight (calculated)
148205.0 Da
IEP (calculated)
5.572
GRAVY (calculated)
-0.212
Length
1339 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEFGAGGSRW PLPRGDAAEA RPPPPPGDRE EVASPRFDSS RALRLLRELG TNVTEDLVVL MPNLLSFLKH DDPATVKQSI ASGTNLFPAV LEEMTLQVNK
0101: CGKLETWLED MWACMKQFKD AVCGVMNEPG PIATKLLALK FVETWILCCT PQANSDQVQP TEGKNWRFDT SRSSQFHPSL DPAILEADAH RALLLLLDIL
0201: RTAYAHRGSF LVGTINSLAA VVKIRPIYYD RVLPVLLDFD PGLETAKGAH SASLRYAVRA AFLGFLRSPH QAMIESKDIL VRRLRVLSPG EAMEQNIRQA
0301: EKMSRNIERA SRASKDESTS WEMPYGDINR KKPAVRSSDT FTTSDGIAKR ARFDMSATSN LPVLGLSDYS DMQADNDASV GHSSDPAILN NEVSPVEKMI
0401: EMIGALLAEG ERGAESLGIL VSTVEADVMA DIVIETMKHL PEASFHLATN NGVQQLNFKY SSGLVTQNLP ANSDSTLFTA QSTPTADGVS ISPSDAFVMT
0501: SVHDAKRDPR RDPRRLDPRR IVSSSAVNSI QVKMETNSVH QTDNLSNTLY SNSRKAENYS DYQGDLHKNE GEQQSASQPN QTIAKDKLEL LDVVTEPEPT
0601: FEVEAPVDVR IHSSDVDEDI VKPMSSVVNS LDESDSMDLE VDPFLPAPKA PTPDDTNDDL PIITSQLELS EKGKISINKL AIGRILDDYK KNSFNARFSL
0701: LAHLIAQSAA DDNIMDLIQR HIIFHSHDQE GYELAMHVLY QLQSISVANS PESSTSTSKH YEKFFISLAR SLIDSLPASD KSFSKLLCDA PYLPESLFRL
0801: LEDLCMSEDN SQQLKDGDGD RVTQGLGTVW SLILGRPPLR HVCLDIALKC AAHSQDEVRG KAVRLVAKRL YDLTYATEKI EQFAIESLVG VANEHTVDTD
0901: INSKSLKEST AEIEVGSQGT SVSGSQIPDT EFSENGPFKT SSVSTKQSAV SVSEAKRRTS LFFALCTKRS SLLQHLFNAY GRSPKVVKQC IHWHMPNLIR
1001: NLGPSCPELL NIIHNPPEGS EHLITLELIL IWDKGSTNRF HNLIVCFLIL KTLQTLTEDS NPSADLVAAV KQLYNTKLKD ASILIPLLPS FPKEEVLPIF
1101: PRLVDLPLER FQDVLARILQ GTAHTGPALT PAEVLIAIHD INPEKDKVAL KKVMFTLHTS ASRAADGDSF QVTDACTACF EQRTVFTQQV LEKSLNQLVD
1201: RIPIPLLFMR TVIQALDAFP ALVDFVMGIL SRLIDKQIWK MPKLWVGFLK LSFQTQPRSF DVLLQLPPPQ LEFMLNKYPN LRTPLSSFVN QRNMHNTLPR
1301: QILNILGIFS ETQQAPMAFV TATLQTADAT TSLPGATLM
0101: CGKLETWLED MWACMKQFKD AVCGVMNEPG PIATKLLALK FVETWILCCT PQANSDQVQP TEGKNWRFDT SRSSQFHPSL DPAILEADAH RALLLLLDIL
0201: RTAYAHRGSF LVGTINSLAA VVKIRPIYYD RVLPVLLDFD PGLETAKGAH SASLRYAVRA AFLGFLRSPH QAMIESKDIL VRRLRVLSPG EAMEQNIRQA
0301: EKMSRNIERA SRASKDESTS WEMPYGDINR KKPAVRSSDT FTTSDGIAKR ARFDMSATSN LPVLGLSDYS DMQADNDASV GHSSDPAILN NEVSPVEKMI
0401: EMIGALLAEG ERGAESLGIL VSTVEADVMA DIVIETMKHL PEASFHLATN NGVQQLNFKY SSGLVTQNLP ANSDSTLFTA QSTPTADGVS ISPSDAFVMT
0501: SVHDAKRDPR RDPRRLDPRR IVSSSAVNSI QVKMETNSVH QTDNLSNTLY SNSRKAENYS DYQGDLHKNE GEQQSASQPN QTIAKDKLEL LDVVTEPEPT
0601: FEVEAPVDVR IHSSDVDEDI VKPMSSVVNS LDESDSMDLE VDPFLPAPKA PTPDDTNDDL PIITSQLELS EKGKISINKL AIGRILDDYK KNSFNARFSL
0701: LAHLIAQSAA DDNIMDLIQR HIIFHSHDQE GYELAMHVLY QLQSISVANS PESSTSTSKH YEKFFISLAR SLIDSLPASD KSFSKLLCDA PYLPESLFRL
0801: LEDLCMSEDN SQQLKDGDGD RVTQGLGTVW SLILGRPPLR HVCLDIALKC AAHSQDEVRG KAVRLVAKRL YDLTYATEKI EQFAIESLVG VANEHTVDTD
0901: INSKSLKEST AEIEVGSQGT SVSGSQIPDT EFSENGPFKT SSVSTKQSAV SVSEAKRRTS LFFALCTKRS SLLQHLFNAY GRSPKVVKQC IHWHMPNLIR
1001: NLGPSCPELL NIIHNPPEGS EHLITLELIL IWDKGSTNRF HNLIVCFLIL KTLQTLTEDS NPSADLVAAV KQLYNTKLKD ASILIPLLPS FPKEEVLPIF
1101: PRLVDLPLER FQDVLARILQ GTAHTGPALT PAEVLIAIHD INPEKDKVAL KKVMFTLHTS ASRAADGDSF QVTDACTACF EQRTVFTQQV LEKSLNQLVD
1201: RIPIPLLFMR TVIQALDAFP ALVDFVMGIL SRLIDKQIWK MPKLWVGFLK LSFQTQPRSF DVLLQLPPPQ LEFMLNKYPN LRTPLSSFVN QRNMHNTLPR
1301: QILNILGIFS ETQQAPMAFV TATLQTADAT TSLPGATLM
0001: MAAPAAATAR AQALSLLAAA NNHGDLAVKL SSLRQVKEIL LSLEPSLSAE IFPYLAELHL SREILVRKSL IEIIEEVGLR MLDHSYVLVS VLLVLSRDED
0101: PTVAKKSISV GTTFFCTILE EMAMQFHHRG KVDRWCGELW TWMVKFKDTV FATALEPGCV GVKVLALKFM ETFILLFTPD ASDPEKASSE GSRHMFNISW
0201: LAGGHPILNP ATLMSEANRT FGILVDFIQS ANRLPGALTI SVISCLAVVA RKRPVHYNTV LSVLLEFHPN LETVKGCHAA SVQYSIRTAF LGFLRCTFSP
0301: IIESRDKLLR AFRAMNAADV ADQVLRQVDK LVRNNERAAR ENWSGKNNQV ISHQNSWDLS KKRIMPQGED DTINGEVAPK RVRHNTNMHL TQQVQTNESL
0401: QGPVSINGIS SGNHLSDSEL TPVEQMVSMI GALLAEGDRG AASLEILISK LHPDMLADIV ITSMKHLPST PPTLASSVAT PADIVVSSST NTVHSPTPPA
0501: QLPFDPILPA GSSFSEVPSL SSSVADPRRD PRRDPRRMDP RRLNSSVGPT SLPVGEGKES VPVQKDISTL LSKPVSVSAV TPGATGSVHS TAVELSQNKM
0601: MGSSGIRIID PPECREDLLT VPNECSYPSK EISSLDVPLS PCRDDEGIRE TKYSVPDLDM LSVPDFDQHS PSASVPDFDQ DPPAASDITA PEESYRELDP
0701: VPSYVELTTE QSKTVGKLAI ERIIESNRHV FGFDCNKIRM ALIARLIARI DAGSDVATIL RELISVDHRE FKGHDLVLHV LYHLHSMAIL DTDESSFYAT
0801: VYENFLISVA RSFLDALPAS DKSFSRLFGE APHLPDSAIN LLDELCSTRH DPVGKEVCDS ERVTQGLGAV WSLILVRPNE RKACLAIALK CSVHSEEEVR
0901: AKAIRLVTNK LYHLTYIAEH VEQFATDMLL TAVNSETNLS QTASTAEGIK MEAKSQITLT TESLGSGNSD IPSQQDLQTS REVSVISISE AQRLISLFFA
1001: LCKKKPSLLR LVFEVYGRAP KMVNQAFHRH IPILIRELGS SYTELLQIIS DPPKGSENLL TYVLQILTQE LAPSLDLIAT VKHLYETKLK DVSILIPLLS
1101: SLTKDEVLPI FPPLLNLPPE KFQLALAHIL QGSAHTGPAL TPAEVLIAIH DIVPEKDGPP LKKITDACSA CFEQRTVFTQ QVLAKALGQM VDRTPLPLLF
1201: MRTVIQAIDA FPTLVDFVME ILSKLVRKQI WRLPKLWPGF LKCVSQTKPH SFPVLLELPV PQLESIMKKF PDLRPSLTAY ANQPTIRSSL PNSALSVLGL
1301: DNGQDSRSQM HPSDATSSIH GAALT
0101: PTVAKKSISV GTTFFCTILE EMAMQFHHRG KVDRWCGELW TWMVKFKDTV FATALEPGCV GVKVLALKFM ETFILLFTPD ASDPEKASSE GSRHMFNISW
0201: LAGGHPILNP ATLMSEANRT FGILVDFIQS ANRLPGALTI SVISCLAVVA RKRPVHYNTV LSVLLEFHPN LETVKGCHAA SVQYSIRTAF LGFLRCTFSP
0301: IIESRDKLLR AFRAMNAADV ADQVLRQVDK LVRNNERAAR ENWSGKNNQV ISHQNSWDLS KKRIMPQGED DTINGEVAPK RVRHNTNMHL TQQVQTNESL
0401: QGPVSINGIS SGNHLSDSEL TPVEQMVSMI GALLAEGDRG AASLEILISK LHPDMLADIV ITSMKHLPST PPTLASSVAT PADIVVSSST NTVHSPTPPA
0501: QLPFDPILPA GSSFSEVPSL SSSVADPRRD PRRDPRRMDP RRLNSSVGPT SLPVGEGKES VPVQKDISTL LSKPVSVSAV TPGATGSVHS TAVELSQNKM
0601: MGSSGIRIID PPECREDLLT VPNECSYPSK EISSLDVPLS PCRDDEGIRE TKYSVPDLDM LSVPDFDQHS PSASVPDFDQ DPPAASDITA PEESYRELDP
0701: VPSYVELTTE QSKTVGKLAI ERIIESNRHV FGFDCNKIRM ALIARLIARI DAGSDVATIL RELISVDHRE FKGHDLVLHV LYHLHSMAIL DTDESSFYAT
0801: VYENFLISVA RSFLDALPAS DKSFSRLFGE APHLPDSAIN LLDELCSTRH DPVGKEVCDS ERVTQGLGAV WSLILVRPNE RKACLAIALK CSVHSEEEVR
0901: AKAIRLVTNK LYHLTYIAEH VEQFATDMLL TAVNSETNLS QTASTAEGIK MEAKSQITLT TESLGSGNSD IPSQQDLQTS REVSVISISE AQRLISLFFA
1001: LCKKKPSLLR LVFEVYGRAP KMVNQAFHRH IPILIRELGS SYTELLQIIS DPPKGSENLL TYVLQILTQE LAPSLDLIAT VKHLYETKLK DVSILIPLLS
1101: SLTKDEVLPI FPPLLNLPPE KFQLALAHIL QGSAHTGPAL TPAEVLIAIH DIVPEKDGPP LKKITDACSA CFEQRTVFTQ QVLAKALGQM VDRTPLPLLF
1201: MRTVIQAIDA FPTLVDFVME ILSKLVRKQI WRLPKLWPGF LKCVSQTKPH SFPVLLELPV PQLESIMKKF PDLRPSLTAY ANQPTIRSSL PNSALSVLGL
1301: DNGQDSRSQM HPSDATSSIH GAALT
Arabidopsis Description
CONTAINS InterPro DOMAIN/s: Symplekin tight junction protein C-terminal (InterPro:IPR022075); BEST Arabidopsis thaliana protein match is: HEAT repeat-containing protein (TAIR:AT5G01400.1); Has 593 Blast hits to 297 proteins in 111 species: Archae - /.../teria - 3; Metazoa - 139; Fungi - 49; Plants - 57; Viruses - 0; Other Eukaryotes - 345 (source: NCBI BLink). [Source:TAIR;Acc:AT1G27595]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.