Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 3
- cytosol 1
- plasma membrane 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90095 | Canola | plastid | 94.25 | 95.09 |
| CDX84921 | Canola | plastid | 83.48 | 86.15 |
| CDY27621 | Canola | plasma membrane, plastid | 82.67 | 86.1 |
| AT1G27595.1 | Thale cress | nucleus | 82.3 | 84.23 |
| CDY11784 | Canola | cytosol | 13.27 | 75.0 |
| CDY11783 | Canola | endoplasmic reticulum, plasma membrane | 8.26 | 69.14 |
| VIT_18s0001g08130.t01 | Wine grape | extracellular, plasma membrane, plastid | 10.55 | 59.09 |
| KRH52859 | Soybean | nucleus | 51.47 | 51.93 |
| KRH62152 | Soybean | plasma membrane | 50.96 | 51.45 |
| VIT_18s0001g08140.t01 | Wine grape | mitochondrion | 40.04 | 50.89 |
| Solyc04g076910.2.1 | Tomato | nucleus | 37.98 | 44.78 |
| CDY04840 | Canola | plastid | 31.56 | 29.42 |
Protein Annotations
| EnsemblPlants:CDY11788 | EnsemblPlantsGene:GSBRNA2T00050029001 | GO:GO:0003674 | GO:GO:0005488 | InterPro:ARM-type_fold | InterPro:Symplekin/Pta1_N |
| InterPro:Symplekin_C | ncoils:Coil | PANTHER:PTHR15245 | PANTHER:PTHR15245:SF35 | PFAM:PF11935 | PFAM:PF12295 |
| ProteinID:CDY11788 | ProteinID:CDY11788.1 | SEG:seg | SUPFAM:SSF48371 | UniParc:UPI0004EE91F7 | UniProt:A0A078FI68 |
| MapMan:16.2.1.2.9 | : | : | : | : | : |
Description
BnaC03g57900DBnaC03g57900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FI68]
Coordinates
chrLK032014:-:455530..466420
Molecular Weight (calculated)
148624.0 Da
IEP (calculated)
6.571
GRAVY (calculated)
-0.084
Length
1356 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAAATARAQA LSLLAAANNH GDLAVKLSSL RQVKEILLSL EPSLSAEIFP YLTELHSSRE ILVRKSLLEI IEEVGLRMLD HSYALVTVLL VLARDEDPIV
0101: AKKAVSVGTA FYRSILEEMA MQFHHRGKVD RWVGELWTWM VKFKDVVFST ALEPGSVGVK VLALKFMETF ILLFTPDASD PENFSNEGSR QMFNISWLAG
0201: GHPILNSATL MSEANRTFGI LQDLVQSAGR LPGALTVAVV SCDLLGHAFR NKPEPFANLN ISCVSTGLLS DSSLSFSLAV VARKRPVHYN TVLSVLLDFH
0301: PNLVTVKGCH AASVQYSIRT ALLGFLRCTS SPMIESRDKL LRALRAMNAS DVADQAVRQV DKLIRNNERF ARENWSGKSN QAISHPNSWD LSKKRKMSQG
0401: EDDTINGEAA PKRLRHNTNM HLTPQVKISD SPHGPVSING ISPANHPSDS EPTPVEQMVS MIGALLAEGD RGAASLDILI SQLHSDMLAD IVITSMKHLP
0501: SSPPTLTTSL AAPADIVDSM RSPTLQPQLP FDPTLPAGLS VSDVPSLNSA VADPRRDPRR DPRRIDPRRL NSSVGPASLP VGEGKELIPV QMDISGLPSY
0601: PLSVPAVTAG DSGSVHPTTI EHSQNKVVGS SVIRLIDQPD CREDLLTAPS ERVYPSKRKS SLDVPLSPSR DDEGIRETKF SGFETKCRDD LASIPDFDQH
0701: SPSESGPDFY LQPPAASDAT AEEESYRELA SVPSYVELTT EQSETVGKLA LERIIESNRH VCGFDCNKIR MPLIARLIAK IDAGNDVAAI LREHISVDHR
0801: EFKGHELVLH ILYHLHSMAN LDTDETSSYA AVYENFLITV ARSFLDALPA SDKSFSKLFG EAPHLPDSAI KLLDELCSTR HDPTGREISD SERVTQGLGA
0901: VWSLILVRPN ERKAFLAIAL NCSVHSEEDI RAKAIRLVTN KLYHLTYISE HVEKFATDML LTAVNSEADL SQTGFIAEGI KTEAKSQITS TIDSPSSRTS
1001: DTHSQQDLQT SRDVSVLSFA EAQRLISLFF ALCKKKPSLL RLVFEVYGKA PKTVIQAFHR HIPILIRELG SSYKELLHII SDPPKGSENL LTLVLQILTQ
1101: EVAPSSDLIA TVKHLYETKL KDVSILIPLL SSLTKDEVLP IFPPLLNLSP EKFQLALAHI LQGSAHTGPA LTPAEVLIAI HDVVPEKGGP PLKKITDACS
1201: ACFEQRTVFT QQVLAKALGQ MVDRTPLPLL FMRTVIQAID AFPTLVDVVM EILSKLVNRQ IWRLPKLWPG FLKCVSQTQP HSFPVLLELP MPQLESIMKK
1301: FPDLRPSLAT YANQPTIRAS LPNPALSVLG LENGQDSRSQ MHPSDAASSI HGAALT
0101: AKKAVSVGTA FYRSILEEMA MQFHHRGKVD RWVGELWTWM VKFKDVVFST ALEPGSVGVK VLALKFMETF ILLFTPDASD PENFSNEGSR QMFNISWLAG
0201: GHPILNSATL MSEANRTFGI LQDLVQSAGR LPGALTVAVV SCDLLGHAFR NKPEPFANLN ISCVSTGLLS DSSLSFSLAV VARKRPVHYN TVLSVLLDFH
0301: PNLVTVKGCH AASVQYSIRT ALLGFLRCTS SPMIESRDKL LRALRAMNAS DVADQAVRQV DKLIRNNERF ARENWSGKSN QAISHPNSWD LSKKRKMSQG
0401: EDDTINGEAA PKRLRHNTNM HLTPQVKISD SPHGPVSING ISPANHPSDS EPTPVEQMVS MIGALLAEGD RGAASLDILI SQLHSDMLAD IVITSMKHLP
0501: SSPPTLTTSL AAPADIVDSM RSPTLQPQLP FDPTLPAGLS VSDVPSLNSA VADPRRDPRR DPRRIDPRRL NSSVGPASLP VGEGKELIPV QMDISGLPSY
0601: PLSVPAVTAG DSGSVHPTTI EHSQNKVVGS SVIRLIDQPD CREDLLTAPS ERVYPSKRKS SLDVPLSPSR DDEGIRETKF SGFETKCRDD LASIPDFDQH
0701: SPSESGPDFY LQPPAASDAT AEEESYRELA SVPSYVELTT EQSETVGKLA LERIIESNRH VCGFDCNKIR MPLIARLIAK IDAGNDVAAI LREHISVDHR
0801: EFKGHELVLH ILYHLHSMAN LDTDETSSYA AVYENFLITV ARSFLDALPA SDKSFSKLFG EAPHLPDSAI KLLDELCSTR HDPTGREISD SERVTQGLGA
0901: VWSLILVRPN ERKAFLAIAL NCSVHSEEDI RAKAIRLVTN KLYHLTYISE HVEKFATDML LTAVNSEADL SQTGFIAEGI KTEAKSQITS TIDSPSSRTS
1001: DTHSQQDLQT SRDVSVLSFA EAQRLISLFF ALCKKKPSLL RLVFEVYGKA PKTVIQAFHR HIPILIRELG SSYKELLHII SDPPKGSENL LTLVLQILTQ
1101: EVAPSSDLIA TVKHLYETKL KDVSILIPLL SSLTKDEVLP IFPPLLNLSP EKFQLALAHI LQGSAHTGPA LTPAEVLIAI HDVVPEKGGP PLKKITDACS
1201: ACFEQRTVFT QQVLAKALGQ MVDRTPLPLL FMRTVIQAID AFPTLVDVVM EILSKLVNRQ IWRLPKLWPG FLKCVSQTQP HSFPVLLELP MPQLESIMKK
1301: FPDLRPSLAT YANQPTIRAS LPNPALSVLG LENGQDSRSQ MHPSDAASSI HGAALT
0001: MAAPAAATAR AQALSLLAAA NNHGDLAVKL SSLRQVKEIL LSLEPSLSAE IFPYLAELHL SREILVRKSL IEIIEEVGLR MLDHSYVLVS VLLVLSRDED
0101: PTVAKKSISV GTTFFCTILE EMAMQFHHRG KVDRWCGELW TWMVKFKDTV FATALEPGCV GVKVLALKFM ETFILLFTPD ASDPEKASSE GSRHMFNISW
0201: LAGGHPILNP ATLMSEANRT FGILVDFIQS ANRLPGALTI SVISCLAVVA RKRPVHYNTV LSVLLEFHPN LETVKGCHAA SVQYSIRTAF LGFLRCTFSP
0301: IIESRDKLLR AFRAMNAADV ADQVLRQVDK LVRNNERAAR ENWSGKNNQV ISHQNSWDLS KKRIMPQGED DTINGEVAPK RVRHNTNMHL TQQVQTNESL
0401: QGPVSINGIS SGNHLSDSEL TPVEQMVSMI GALLAEGDRG AASLEILISK LHPDMLADIV ITSMKHLPST PPTLASSVAT PADIVVSSST NTVHSPTPPA
0501: QLPFDPILPA GSSFSEVPSL SSSVADPRRD PRRDPRRMDP RRLNSSVGPT SLPVGEGKES VPVQKDISTL LSKPVSVSAV TPGATGSVHS TAVELSQNKM
0601: MGSSGIRIID PPECREDLLT VPNECSYPSK EISSLDVPLS PCRDDEGIRE TKYSVPDLDM LSVPDFDQHS PSASVPDFDQ DPPAASDITA PEESYRELDP
0701: VPSYVELTTE QSKTVGKLAI ERIIESNRHV FGFDCNKIRM ALIARLIARI DAGSDVATIL RELISVDHRE FKGHDLVLHV LYHLHSMAIL DTDESSFYAT
0801: VYENFLISVA RSFLDALPAS DKSFSRLFGE APHLPDSAIN LLDELCSTRH DPVGKEVCDS ERVTQGLGAV WSLILVRPNE RKACLAIALK CSVHSEEEVR
0901: AKAIRLVTNK LYHLTYIAEH VEQFATDMLL TAVNSETNLS QTASTAEGIK MEAKSQITLT TESLGSGNSD IPSQQDLQTS REVSVISISE AQRLISLFFA
1001: LCKKKPSLLR LVFEVYGRAP KMVNQAFHRH IPILIRELGS SYTELLQIIS DPPKGSENLL TYVLQILTQE LAPSLDLIAT VKHLYETKLK DVSILIPLLS
1101: SLTKDEVLPI FPPLLNLPPE KFQLALAHIL QGSAHTGPAL TPAEVLIAIH DIVPEKDGPP LKKITDACSA CFEQRTVFTQ QVLAKALGQM VDRTPLPLLF
1201: MRTVIQAIDA FPTLVDFVME ILSKLVRKQI WRLPKLWPGF LKCVSQTKPH SFPVLLELPV PQLESIMKKF PDLRPSLTAY ANQPTIRSSL PNSALSVLGL
1301: DNGQDSRSQM HPSDATSSIH GAALT
0101: PTVAKKSISV GTTFFCTILE EMAMQFHHRG KVDRWCGELW TWMVKFKDTV FATALEPGCV GVKVLALKFM ETFILLFTPD ASDPEKASSE GSRHMFNISW
0201: LAGGHPILNP ATLMSEANRT FGILVDFIQS ANRLPGALTI SVISCLAVVA RKRPVHYNTV LSVLLEFHPN LETVKGCHAA SVQYSIRTAF LGFLRCTFSP
0301: IIESRDKLLR AFRAMNAADV ADQVLRQVDK LVRNNERAAR ENWSGKNNQV ISHQNSWDLS KKRIMPQGED DTINGEVAPK RVRHNTNMHL TQQVQTNESL
0401: QGPVSINGIS SGNHLSDSEL TPVEQMVSMI GALLAEGDRG AASLEILISK LHPDMLADIV ITSMKHLPST PPTLASSVAT PADIVVSSST NTVHSPTPPA
0501: QLPFDPILPA GSSFSEVPSL SSSVADPRRD PRRDPRRMDP RRLNSSVGPT SLPVGEGKES VPVQKDISTL LSKPVSVSAV TPGATGSVHS TAVELSQNKM
0601: MGSSGIRIID PPECREDLLT VPNECSYPSK EISSLDVPLS PCRDDEGIRE TKYSVPDLDM LSVPDFDQHS PSASVPDFDQ DPPAASDITA PEESYRELDP
0701: VPSYVELTTE QSKTVGKLAI ERIIESNRHV FGFDCNKIRM ALIARLIARI DAGSDVATIL RELISVDHRE FKGHDLVLHV LYHLHSMAIL DTDESSFYAT
0801: VYENFLISVA RSFLDALPAS DKSFSRLFGE APHLPDSAIN LLDELCSTRH DPVGKEVCDS ERVTQGLGAV WSLILVRPNE RKACLAIALK CSVHSEEEVR
0901: AKAIRLVTNK LYHLTYIAEH VEQFATDMLL TAVNSETNLS QTASTAEGIK MEAKSQITLT TESLGSGNSD IPSQQDLQTS REVSVISISE AQRLISLFFA
1001: LCKKKPSLLR LVFEVYGRAP KMVNQAFHRH IPILIRELGS SYTELLQIIS DPPKGSENLL TYVLQILTQE LAPSLDLIAT VKHLYETKLK DVSILIPLLS
1101: SLTKDEVLPI FPPLLNLPPE KFQLALAHIL QGSAHTGPAL TPAEVLIAIH DIVPEKDGPP LKKITDACSA CFEQRTVFTQ QVLAKALGQM VDRTPLPLLF
1201: MRTVIQAIDA FPTLVDFVME ILSKLVRKQI WRLPKLWPGF LKCVSQTKPH SFPVLLELPV PQLESIMKKF PDLRPSLTAY ANQPTIRSSL PNSALSVLGL
1301: DNGQDSRSQM HPSDATSSIH GAALT
Arabidopsis Description
CONTAINS InterPro DOMAIN/s: Symplekin tight junction protein C-terminal (InterPro:IPR022075); BEST Arabidopsis thaliana protein match is: HEAT repeat-containing protein (TAIR:AT5G01400.1); Has 593 Blast hits to 297 proteins in 111 species: Archae - /.../teria - 3; Metazoa - 139; Fungi - 49; Plants - 57; Viruses - 0; Other Eukaryotes - 345 (source: NCBI BLink). [Source:TAIR;Acc:AT1G27595]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.