Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY01209 | Canola | cytosol | 100.0 | 100.0 |
| Bra032775.1-P | Field mustard | cytosol | 85.82 | 87.68 |
| CDY01210 | Canola | cytosol | 85.82 | 87.68 |
| AT4G14270.1 | Thale cress | cytosol | 44.68 | 44.06 |
| CDY35413 | Canola | cytosol, mitochondrion | 30.5 | 29.45 |
| CDY22525 | Canola | cytosol, mitochondrion | 29.79 | 28.77 |
| CDY06923 | Canola | mitochondrion | 31.21 | 28.03 |
| CDY14771 | Canola | mitochondrion | 31.21 | 28.03 |
Protein Annotations
| EnsemblPlants:CDY12749 | EnsemblPlantsGene:GSBRNA2T00070334001 | PANTHER:PTHR33790 | PANTHER:PTHR33790:SF1 | ProteinID:CDY12749 | ProteinID:CDY12749.1 |
| UniParc:UPI0004EF3451 | UniProt:A0A078FID3 | MapMan:35.1 | : | : | : |
Description
BnaC04g28920DBnaA04g06100D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FID3]
Coordinates
chrLK032026:+:616228..617114
Molecular Weight (calculated)
16469.1 Da
IEP (calculated)
5.028
GRAVY (calculated)
-0.765
Length
141 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTVVDRSVS TLNPNAPAFD PVGFREVEDF SPKWWELVTT SKWFRDFWLS ANSEEYEFGE FSDMEDEFEE LVMTSSGENE MDGSSVRESD VGRYLKVLLS
101: MAKSTKGKLY RSNVSCSAKY NQKKMNPNFY CRRNHHIYQP R
101: MAKSTKGKLY RSNVSCSAKY NQKKMNPNFY CRRNHHIYQP R
001: MTATIDRRLS TLNPNAPVFD PVEFREVEDF SPKWWDLVTT SKWFRDFWLS ANSENEFLGG DDFSVMEEEF EEMIASSDGG SMADTVTEAD VASYLKMLLN
101: IAESTKEKIY RSKVSSCSPK YNQKKYMNPN FNCRRNHHIY QPR
101: IAESTKEKIY RSKVSSCSPK YNQKKYMNPN FNCRRNHHIY QPR
Arabidopsis Description
CID2Polyadenylate-binding protein-interacting protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94AR4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.