CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35413	Canola	cytosol, mitochondrion	86.99	86.99
Bra000227.1-P	Field mustard	nucleus	60.96	71.77
CDY06923	Canola	mitochondrion	76.71	71.34
CDY14771	Canola	mitochondrion	76.71	71.34
AT2G41430.4	Thale cress	mitochondrion	79.45	71.17
KRG95151	Soybean	cytosol	41.78	58.65
KRH66836	Soybean	cytosol	41.1	57.14
Solyc10g079820.1.1	Tomato	mitochondrion	47.95	44.87
PGSC0003DMT400076750	Potato	mitochondrion	47.95	44.87
Solyc04g017690.2.1	Tomato	mitochondrion, nucleus, plastid	48.63	43.83
PGSC0003DMT400019731	Potato	cytosol, mitochondrion, plastid	47.95	41.92
TraesCS1A01G116700.1	Wheat	cytosol	34.93	39.23
KXG39364	Sorghum	nucleus	39.04	38.51
TraesCS1B01G136700.2	Wheat	cytosol	36.3	38.41
TraesCS1D01G117900.1	Wheat	cytosol	35.62	37.68
TraesCS2D01G129500.1	Wheat	cytosol	39.04	36.54
EER99855	Sorghum	cytosol	41.1	36.36
TraesCS2A01G127100.1	Wheat	cytosol	38.36	35.9
Zm00001d022416_P001	Maize	cytosol	27.4	35.4
Os07t0661400-01	Rice	plastid	36.3	34.42
GSMUA_Achr8P29540_001	Banana	cytosol	38.36	34.36
TraesCS4B01G239000.1	Wheat	cytosol	29.45	34.13
GSMUA_Achr1P11430_001	Banana	cytosol, extracellular	37.67	33.74
Zm00001d007097_P001	Maize	cytosol, plastid	36.3	33.33
VIT_08s0007g05880.t01	Wine grape	cytosol	47.26	33.17
Os03t0353400-01	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	36.3	33.12
CDY01210	Canola	cytosol	29.45	31.16
CDY01209	Canola	cytosol	28.77	29.79
CDY12749	Canola	cytosol	28.77	29.79
TraesCS2B01G148900.1	Wheat	cytosol	36.99	28.88
Zm00001d047470_P005	Maize	plastid	33.56	28.32
Zm00001d048165_P002	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	30.14	26.99

Protein Annotations

EnsemblPlants:CDY22525	EnsemblPlantsGene:GSBRNA2T00019107001	PANTHER:PTHR33790	PANTHER:PTHR33790:SF1	ProteinID:CDY22525	ProteinID:CDY22525.1
UniParc:UPI0004EEF71D	UniProt:A0A078G7V3	MapMan:35.1	:	:	:

Description

BnaC03g23350DBnaC03g23350D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G7V3]

Coordinates

chrLK032132:+:391719..392490

Molecular Weight (calculated)

16575.1 Da

IEP (calculated)

4.482

GRAVY (calculated)

-0.626

Length

146 amino acids

Sequence
(BLAST)

001: MAMVSGRRST LNPDAPLFVP AAVRQVEDFS PEWWQLVTTS TWYHDYWISQ HQGADGFYDG EVDVADLLPE SFDFDDMEDL FEADEFGGEI YHAPSDFGLG
101: KNGEMVRRAS GNRSPRLVVE PAKYAEKPAK WANQRVAAPR NIHQPR

Best Arabidopsis Sequence Match ( AT2G41430.5 )
(BLAST)

001: MAMVSGRRST LNPDAPLFIP AAVRQVEDFS PEWWQLVTTS TWYPDYWISQ QQQGADGFYD NGENENGGGH IDVADLLPES FDFDDMEDFF DTDAAEFDQG
101: FDGRMYYQAP SEFGFGKNGE MVKKSSGNRS PRSIVEPAKY AEKPAKWGNQ RVAAAPRNIH QPR

Arabidopsis Description

ERD15LSR1 [Source:UniProtKB/TrEMBL;Acc:A0A178VWR6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.