CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH66836	Soybean	cytosol	97.12	96.19
Bra000227.1-P	Field mustard	nucleus	58.65	49.19
CDY22525	Canola	cytosol, mitochondrion	58.65	41.78
CDY35413	Canola	cytosol, mitochondrion	58.65	41.78
Bra016934.1-P	Field mustard	mitochondrion	58.65	38.85
CDY06923	Canola	mitochondrion	58.65	38.85
CDY14771	Canola	mitochondrion	58.65	38.85
AT2G41430.4	Thale cress	mitochondrion	58.65	37.42
Solyc04g017690.2.1	Tomato	mitochondrion, nucleus, plastid	52.88	33.95
Solyc10g079820.1.1	Tomato	mitochondrion	50.0	33.33
PGSC0003DMT400076750	Potato	mitochondrion	50.0	33.33
Zm00001d022416_P001	Maize	cytosol	35.58	32.74
PGSC0003DMT400019731	Potato	cytosol, mitochondrion, plastid	50.0	31.14
VIT_08s0007g05880.t01	Wine grape	cytosol	59.62	29.81
GSMUA_Achr8P29540_001	Banana	cytosol	43.27	27.61
KRH62868	Soybean	cytosol, mitochondrion, nucleus, plastid	42.31	26.51
GSMUA_Achr1P11430_001	Banana	cytosol, extracellular	40.38	25.77
KRH73235	Soybean	cytosol	30.77	25.6
KRH14891	Soybean	cytosol	29.81	24.8
EER99855	Sorghum	cytosol	38.46	24.24
KRH29966	Soybean	cytosol, mitochondrion, nucleus, plastid	39.42	24.12
Os07t0661400-01	Rice	plastid	35.58	24.03
TraesCS4B01G239000.1	Wheat	cytosol	28.85	23.81
Zm00001d048165_P002	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	36.54	23.31
Zm00001d007097_P001	Maize	cytosol, plastid	35.58	23.27
Os03t0353400-01	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	34.62	22.5
TraesCS1B01G136700.2	Wheat	cytosol	29.81	22.46
TraesCS1D01G117900.1	Wheat	cytosol	29.81	22.46
TraesCS1A01G116700.1	Wheat	cytosol	27.88	22.31
KXG39364	Sorghum	nucleus	31.73	22.3
TraesCS2A01G127100.1	Wheat	cytosol	31.73	21.15
TraesCS2D01G129500.1	Wheat	cytosol	31.73	21.15
TraesCS2B01G148900.1	Wheat	cytosol	31.73	17.65
Zm00001d047470_P005	Maize	plastid	27.88	16.76

Protein Annotations

EMBL:ACUP02012086	EMBL:BT089307	EnsemblPlants:KRG95151	EnsemblPlantsGene:GLYMA_19G133800	EntrezGene:100305613	PANTHER:PTHR33790
PANTHER:PTHR33790:SF1	ProteinID:KRG95151	ProteinID:KRG95151.1	UniParc:UPI0001B15911	UniProt:C6SVW4	MapMan:35.1

Description

hypothetical protein

Coordinates

chr19:+:39487703..39489604

Molecular Weight (calculated)

11759.2 Da

IEP (calculated)

3.631

GRAVY (calculated)

-0.546

Length

104 amino acids

Sequence
(BLAST)

001: MALVSGGRST LNPNAPLYIP AAFRQVEDFS PEWWQLVTTL TWYHDYWLSQ QHDDGAFYGE DGFDGNDVVD LLPDSFDFDA GEDLFEEFIR SSESQEETGP
101: KGTA

Best Arabidopsis Sequence Match ( AT2G41430.5 )
(BLAST)

001: MAMVSGRRST LNPDAPLFIP AAVRQVEDFS PEWWQLVTTS TWYPDYWISQ QQQGADGFYD NGENENGGGH IDVADLLPES FDFDDMEDFF DTDAAEFDQG
101: FDGRMYYQAP SEFGFGKNGE MVKKSSGNRS PRSIVEPAKY AEKPAKWGNQ RVAAAPRNIH QPR

Arabidopsis Description

ERD15LSR1 [Source:UniProtKB/TrEMBL;Acc:A0A178VWR6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.