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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • plastid 2
  • cytosol 2
  • mitochondrion 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d007097_P001 Maize cytosol, plastid 75.15 77.99
Zm00001d022416_P001 Maize cytosol 51.52 75.22
Os07t0661400-01 Rice plastid 59.39 63.64
TraesCS2A01G127100.1 Wheat cytosol 58.18 61.54
TraesCS2D01G129500.1 Wheat cytosol 57.58 60.9
TraesCS2B01G148900.1 Wheat cytosol 56.97 50.27
KXG39364 Sorghum nucleus 40.61 45.27
CDY22525 Canola cytosol, mitochondrion 36.36 41.1
KRH66836 Soybean cytosol 24.85 39.05
CDY35413 Canola cytosol, mitochondrion 34.55 39.04
GSMUA_Achr1P11430_001 Banana cytosol, extracellular 38.18 38.65
KRG95151 Soybean cytosol 24.24 38.46
GSMUA_Achr8P29540_001 Banana cytosol 36.97 37.42
Bra016934.1-P Field mustard mitochondrion 34.55 36.31
CDY06923 Canola mitochondrion 34.55 36.31
CDY14771 Canola mitochondrion 34.55 36.31
AT2G41430.4 Thale cress mitochondrion 35.76 36.2
Bra000227.1-P Field mustard nucleus 24.24 32.26
VIT_13s0019g01660.t01 Wine grape mitochondrion 33.33 31.98
KRH29966 Soybean cytosol, mitochondrion, nucleus, plastid 32.73 31.76
Solyc04g017690.2.1 Tomato mitochondrion, nucleus, plastid 30.91 31.48
KRH62868 Soybean cytosol, mitochondrion, nucleus, plastid 30.91 30.72
Solyc10g079820.1.1 Tomato mitochondrion 28.48 30.13
PGSC0003DMT400019731 Potato cytosol, mitochondrion, plastid 30.3 29.94
PGSC0003DMT400076750 Potato mitochondrion 27.88 29.49
VIT_08s0007g05880.t01 Wine grape cytosol 31.52 25.0
Protein Annotations
EnsemblPlants:EER99855EnsemblPlantsGene:SORBI_3002G405600EntrezGene:8072261PANTHER:PTHR33790PANTHER:PTHR33790:SF1ProteinID:EER99855
ProteinID:EER99855.1RefSeq:XP_002463334.1SEG:segunigene:Sbi.17844UniParc:UPI0001A8475CUniProt:C5X4S5
MapMan:35.2:::::
Description
hypothetical protein
Coordinates
chr2:-:75508756..75510748
Molecular Weight (calculated)
18106.9 Da
IEP (calculated)
5.142
GRAVY (calculated)
-0.327
Length
165 amino acids
Sequence
(BLAST)
001: MSTVAAMASS SLNPNAPLFI PAAYRQVEDF SPEWWELVKT TAWFRDHWFR QHQLHEAAYD AAFAADAADD FDVAALLPDD SVDLLDMVDT DDLFYAPDVH
101: HHQAAKPAPA PGYDLDVLRA LSVSSPRAAA TVVAAPSPQQ QRYADKPAYH AGGRGAARRA IHQPR
Best Arabidopsis Sequence Match ( AT2G41430.5 )
(BLAST)
001: MAMVSGRRST LNPDAPLFIP AAVRQVEDFS PEWWQLVTTS TWYPDYWISQ QQQGADGFYD NGENENGGGH IDVADLLPES FDFDDMEDFF DTDAAEFDQG
101: FDGRMYYQAP SEFGFGKNGE MVKKSSGNRS PRSIVEPAKY AEKPAKWGNQ RVAAAPRNIH QPR
Arabidopsis Description
ERD15LSR1 [Source:UniProtKB/TrEMBL;Acc:A0A178VWR6]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.