Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 4
- plastid 1
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH62868 | Soybean | cytosol, mitochondrion, nucleus, plastid | 49.42 | 51.2 |
| KRH29966 | Soybean | cytosol, mitochondrion, nucleus, plastid | 48.26 | 48.82 |
| GSMUA_Achr8P29540_001 | Banana | cytosol | 44.19 | 46.63 |
| GSMUA_Achr1P11430_001 | Banana | cytosol, extracellular | 42.44 | 44.79 |
| VIT_08s0007g05880.t01 | Wine grape | cytosol | 52.33 | 43.27 |
| Zm00001d022416_P001 | Maize | cytosol | 27.33 | 41.59 |
| TraesCS2D01G129500.1 | Wheat | cytosol | 35.47 | 39.1 |
| TraesCS2A01G127100.1 | Wheat | cytosol | 34.3 | 37.82 |
| Os07t0661400-01 | Rice | plastid | 33.72 | 37.66 |
| TraesCS1B01G136700.2 | Wheat | cytosol | 29.65 | 36.96 |
| TraesCS1A01G116700.1 | Wheat | cytosol | 27.91 | 36.92 |
| KXG39364 | Sorghum | nucleus | 31.4 | 36.49 |
| Os03t0353400-01 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 33.72 | 36.25 |
| VIT_13s0067g02130.t01 | Wine grape | cytosol | 29.07 | 35.71 |
| TraesCS4B01G239000.1 | Wheat | cytosol | 26.16 | 35.71 |
| TraesCS1D01G117900.1 | Wheat | cytosol | 28.49 | 35.51 |
| Zm00001d007097_P001 | Maize | cytosol, plastid | 31.4 | 33.96 |
| EER99855 | Sorghum | cytosol | 31.98 | 33.33 |
| TraesCS2B01G148900.1 | Wheat | cytosol | 35.47 | 32.62 |
| Zm00001d047470_P005 | Maize | plastid | 27.91 | 27.75 |
| Zm00001d048165_P002 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 23.26 | 24.54 |
Protein Annotations
| ArrayExpress:VIT_13s0019g01660 | EMBL:FN594963 | EnsemblPlants:VIT_13s0019g01660.t01 | EnsemblPlantsGene:VIT_13s0019g01660 | EntrezGene:100267095 | EntrezGene:LOC100267095 |
| InterPro:Ataxin-2_C | PANTHER:PTHR33790 | PANTHER:PTHR33790:SF1 | PFAM:PF07145 | ProteinID:CBI17747 | ProteinID:CBI17747.3 |
| RefSeq:XP_002268033 | RefSeq:XP_002268033.1 | TIGR:TC58823 | UniParc:UPI000198474F | UniProt:D7SQ18 | wikigene:100267095 |
| wikigene:LOC100267095 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr13_random:+:3130767..3134430
Molecular Weight (calculated)
19293.6 Da
IEP (calculated)
4.674
GRAVY (calculated)
-0.719
Length
172 amino acids
Sequence
(BLAST)
(BLAST)
001: MALVSGGRST LNPNAPLFIP AAFRQVEDFS PEWWKLVKTS TWFRDYWLSQ HQDDENFEVN DGADDDVLNL LPETFDLGID EESLDLEVQM EELIQLSETK
101: EGTESASTVS KTGRKPVNGL KLETEALMKN LNLGNSPKGK SPKTPVGPAK YHEKAAQCMS PKYGPRRINQ PR
101: EGTESASTVS KTGRKPVNGL KLETEALMKN LNLGNSPKGK SPKTPVGPAK YHEKAAQCMS PKYGPRRINQ PR
001: MAMVSGRRST LNPDAPLFIP AAVRQVEDFS PEWWQLVTTS TWYPDYWISQ QQQGADGFYD NGENENGGGH IDVADLLPES FDFDDMEDFF DTDAAEFDQG
101: FDGRMYYQAP SEFGFGKNGE MVKKSSGNRS PRSIVEPAKY AEKPAKWGNQ RVAAAPRNIH QPR
101: FDGRMYYQAP SEFGFGKNGE MVKKSSGNRS PRSIVEPAKY AEKPAKWGNQ RVAAAPRNIH QPR
Arabidopsis Description
ERD15LSR1 [Source:UniProtKB/TrEMBL;Acc:A0A178VWR6]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.