Factsheet for Os03t0353400-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plastid, cytosol, plasma membrane, golgi, nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid, secretory
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G117900.1	Wheat	cytosol	58.75	68.12
TraesCS1B01G136700.2	Wheat	cytosol	58.75	68.12
TraesCS1A01G116700.1	Wheat	cytosol	53.75	66.15
KXG39364	Sorghum	nucleus	58.75	63.51
TraesCS4B01G239000.1	Wheat	cytosol	48.75	61.9
Os07t0661400-01	Rice	plastid	50.0	51.95
Zm00001d047470_P005	Maize	plastid	48.12	44.51
Zm00001d048165_P002	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	40.0	39.26
CDY35413	Canola	cytosol, mitochondrion	35.0	38.36
GSMUA_Achr8P29540_001	Banana	cytosol	38.75	38.04
CDY22525	Canola	cytosol, mitochondrion	33.12	36.3
Bra016934.1-P	Field mustard	mitochondrion	34.38	35.03
CDY06923	Canola	mitochondrion	34.38	35.03
CDY14771	Canola	mitochondrion	34.38	35.03
KRG95151	Soybean	cytosol	22.5	34.62
KRH66836	Soybean	cytosol	22.5	34.29
Bra000227.1-P	Field mustard	nucleus	26.25	33.87
AT2G41430.4	Thale cress	mitochondrion	34.38	33.74
VIT_13s0019g01660.t01	Wine grape	mitochondrion	36.25	33.72
Solyc04g017690.2.1	Tomato	mitochondrion, nucleus, plastid	33.12	32.72
GSMUA_Achr1P11430_001	Banana	cytosol, extracellular	33.12	32.52
KRH62868	Soybean	cytosol, mitochondrion, nucleus, plastid	33.12	31.93
Solyc10g079820.1.1	Tomato	mitochondrion	30.62	31.41
KRH29966	Soybean	cytosol, mitochondrion, nucleus, plastid	33.12	31.18
PGSC0003DMT400076750	Potato	mitochondrion	30.0	30.77
PGSC0003DMT400019731	Potato	cytosol, mitochondrion, plastid	30.62	29.34
VIT_08s0007g05880.t01	Wine grape	cytosol	34.38	26.44

Protein Annotations

EMBL:AB110172	EMBL:AK062176	EMBL:AY656247	EnsemblPlants:Os03t0353400-01	EnsemblPlantsGene:Os03g0353400	EntrezGene:4332856
PANTHER:PTHR33790	PANTHER:PTHR33790:SF2	ProteinID:ABF95961.1	ProteinID:BAS84218.1	ProteinID:EAZ26932.1	RefSeq:XP_015632817.1
SEG:seg	UniParc:UPI00001A52D2	UniProt:Q7XXS2	MapMan:35.2	:	:

Description

Similar to Poly(A)-binding protein C-terminal interacting protein 6. (Os03t0353400-01);Similar to Early response to dehydration 15-like protein. (Os03t0353400-02)

Coordinates

chr3:+:13283192..13284513

Molecular Weight (calculated)

17702.4 Da

IEP (calculated)

4.441

GRAVY (calculated)

-0.619

Length

160 amino acids

Sequence
(BLAST)

001: MSATAVSSLN PDAPLFIPAA FRQVEDFSPQ WWDLVKTTAW FRDHWFHEHQ QLDEMADSLA LHDAAADDDD LAGLLPDDAF DDDDDDDLFF DQTHNLLVDP
101: PQPPAALKTD AVLKALSLVS PKGGDAPRGL REKPRHSEKP TKYAGSPRSG GAPRVIHQPR

Best Arabidopsis Sequence Match ( AT2G41430.5 )
(BLAST)

001: MAMVSGRRST LNPDAPLFIP AAVRQVEDFS PEWWQLVTTS TWYPDYWISQ QQQGADGFYD NGENENGGGH IDVADLLPES FDFDDMEDFF DTDAAEFDQG
101: FDGRMYYQAP SEFGFGKNGE MVKKSSGNRS PRSIVEPAKY AEKPAKWGNQ RVAAAPRNIH QPR

Arabidopsis Description

ERD15LSR1 [Source:UniProtKB/TrEMBL;Acc:A0A178VWR6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.