Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- plasma membrane 1
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400019731 | Potato | cytosol, mitochondrion, plastid | 79.63 | 77.25 |
| Solyc10g079820.1.1 | Tomato | mitochondrion | 71.6 | 74.36 |
| KRH66836 | Soybean | cytosol | 35.8 | 55.24 |
| KRG95151 | Soybean | cytosol | 33.95 | 52.88 |
| CDY35413 | Canola | cytosol, mitochondrion | 44.44 | 49.32 |
| CDY22525 | Canola | cytosol, mitochondrion | 43.83 | 48.63 |
| Bra016934.1-P | Field mustard | mitochondrion | 46.3 | 47.77 |
| CDY06923 | Canola | mitochondrion | 46.3 | 47.77 |
| CDY14771 | Canola | mitochondrion | 46.3 | 47.77 |
| Bra000227.1-P | Field mustard | nucleus | 35.19 | 45.97 |
| AT2G41430.4 | Thale cress | mitochondrion | 44.44 | 44.17 |
| Solyc06g050700.2.1 | Tomato | nucleus | 19.75 | 43.24 |
| VIT_08s0007g05880.t01 | Wine grape | cytosol | 53.09 | 41.35 |
| Zm00001d022416_P001 | Maize | cytosol | 27.78 | 39.82 |
| GSMUA_Achr8P29540_001 | Banana | cytosol | 39.51 | 39.26 |
| GSMUA_Achr1P11430_001 | Banana | cytosol, extracellular | 38.27 | 38.04 |
| TraesCS1D01G117900.1 | Wheat | cytosol | 32.1 | 37.68 |
| TraesCS1B01G136700.2 | Wheat | cytosol | 32.1 | 37.68 |
| KXG39364 | Sorghum | nucleus | 33.95 | 37.16 |
| TraesCS1A01G116700.1 | Wheat | cytosol | 29.63 | 36.92 |
| TraesCS4B01G239000.1 | Wheat | cytosol | 27.78 | 35.71 |
| TraesCS2A01G127100.1 | Wheat | cytosol | 33.33 | 34.62 |
| TraesCS2D01G129500.1 | Wheat | cytosol | 33.33 | 34.62 |
| Os03t0353400-01 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 32.72 | 33.12 |
| Os07t0661400-01 | Rice | plastid | 30.25 | 31.82 |
| Zm00001d007097_P001 | Maize | cytosol, plastid | 30.86 | 31.45 |
| EER99855 | Sorghum | cytosol | 31.48 | 30.91 |
| TraesCS2B01G148900.1 | Wheat | cytosol | 33.95 | 29.41 |
| Zm00001d047470_P005 | Maize | plastid | 29.63 | 27.75 |
| Zm00001d048165_P002 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 25.93 | 25.77 |
Protein Annotations
| EnsemblPlants:Solyc04g017690.2.1 | EnsemblPlantsGene:Solyc04g017690.2 | InterPro:Ataxin-2_C | PANTHER:PTHR33790 | PANTHER:PTHR33790:SF1 | PFAM:PF07145 |
| SEG:seg | UniParc:UPI000276733F | UniProt:K4BQG9 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr4:-:7761810..7762863
Molecular Weight (calculated)
18191.2 Da
IEP (calculated)
4.205
GRAVY (calculated)
-0.577
Length
162 amino acids
Sequence
(BLAST)
(BLAST)
001: MALVSGGRSS TLNPNAPLFI PSYVQQVEDF SPEWWNLVTT ATWFRDYWTS QHQGEEYGDD DFGFAGNDVA DLLPENIDLD VDEDILNMEA QFEEFLQSSE
101: SEQQGIKSSL SGVNGLPKGS EALVRTLSMP KPKSLIEPPK LYEKPAKIVS PKNSLRRIQQ PR
101: SEQQGIKSSL SGVNGLPKGS EALVRTLSMP KPKSLIEPPK LYEKPAKIVS PKNSLRRIQQ PR
001: MAMVSGRRST LNPDAPLFIP AAVRQVEDFS PEWWQLVTTS TWYPDYWISQ QQQGADGFYD NGENENGGGH IDVADLLPES FDFDDMEDFF DTDAAEFDQG
101: FDGRMYYQAP SEFGFGKNGE MVKKSSGNRS PRSIVEPAKY AEKPAKWGNQ RVAAAPRNIH QPR
101: FDGRMYYQAP SEFGFGKNGE MVKKSSGNRS PRSIVEPAKY AEKPAKWGNQ RVAAAPRNIH QPR
Arabidopsis Description
ERD15LSR1 [Source:UniProtKB/TrEMBL;Acc:A0A178VWR6]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.