Subcellular Localization
min:
: max
Winner_takes_all: extracellular, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 2
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P29540_001 | Banana | cytosol | 60.74 | 60.74 |
| Zm00001d022416_P001 | Maize | cytosol | 31.9 | 46.02 |
| VIT_13s0019g01660.t01 | Wine grape | mitochondrion | 44.79 | 42.44 |
| KRH66836 | Soybean | cytosol | 26.38 | 40.95 |
| Zm00001d007097_P001 | Maize | cytosol, plastid | 39.88 | 40.88 |
| KRG95151 | Soybean | cytosol | 25.77 | 40.38 |
| Solyc10g079820.1.1 | Tomato | mitochondrion | 36.81 | 38.46 |
| Solyc04g017690.2.1 | Tomato | mitochondrion, nucleus, plastid | 38.04 | 38.27 |
| EER99855 | Sorghum | cytosol | 38.65 | 38.18 |
| KXG39364 | Sorghum | nucleus | 34.36 | 37.84 |
| PGSC0003DMT400076750 | Potato | mitochondrion | 36.2 | 37.82 |
| CDY35413 | Canola | cytosol, mitochondrion | 33.74 | 37.67 |
| CDY22525 | Canola | cytosol, mitochondrion | 33.74 | 37.67 |
| CDY14771 | Canola | mitochondrion | 36.2 | 37.58 |
| CDY06923 | Canola | mitochondrion | 36.2 | 37.58 |
| Bra016934.1-P | Field mustard | mitochondrion | 36.2 | 37.58 |
| Os07t0661400-01 | Rice | plastid | 34.36 | 36.36 |
| TraesCS1D01G117900.1 | Wheat | cytosol | 30.67 | 36.23 |
| AT2G41430.4 | Thale cress | mitochondrion | 36.2 | 36.2 |
| PGSC0003DMT400019731 | Potato | cytosol, mitochondrion, plastid | 36.81 | 35.93 |
| TraesCS4B01G239000.1 | Wheat | cytosol | 27.61 | 35.71 |
| TraesCS1B01G136700.2 | Wheat | cytosol | 30.06 | 35.51 |
| TraesCS1A01G116700.1 | Wheat | cytosol | 28.22 | 35.38 |
| TraesCS2D01G129500.1 | Wheat | cytosol | 33.74 | 35.26 |
| GSMUA_Achr9P17880_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 29.45 | 34.78 |
| TraesCS2A01G127100.1 | Wheat | cytosol | 33.13 | 34.62 |
| KRH62868 | Soybean | cytosol, mitochondrion, nucleus, plastid | 34.97 | 34.34 |
| Bra000227.1-P | Field mustard | nucleus | 25.77 | 33.87 |
| KRH29966 | Soybean | cytosol, mitochondrion, nucleus, plastid | 34.97 | 33.53 |
| Os03t0353400-01 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 32.52 | 33.12 |
| TraesCS2B01G148900.1 | Wheat | cytosol | 34.97 | 30.48 |
| VIT_08s0007g05880.t01 | Wine grape | cytosol | 37.42 | 29.33 |
| Zm00001d048165_P002 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 25.77 | 25.77 |
| Zm00001d047470_P005 | Maize | plastid | 23.93 | 22.54 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P11430_001 | EnsemblPlants:GSMUA_Achr1T11430_001 | EnsemblPlantsGene:GSMUA_Achr1G11430_001 | InterPro:Ataxin-2_C | PANTHER:PTHR33790 | PANTHER:PTHR33790:SF1 |
| PFAM:PF07145 | UniParc:UPI000295663A | UniProt:M0RZ02 | MapMan:35.1 | : | : |
Description
Putative Polyadenylate-binding protein-interacting protein 2 [Source:GMGC_GENE;Acc:GSMUA_Achr1G11430_001]
Coordinates
chr1:-:8776164..8777026
Molecular Weight (calculated)
18595.9 Da
IEP (calculated)
4.367
GRAVY (calculated)
-0.513
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVSSAMKST LNPNAPLFIP MALQQVEDFS PEWWELVNTT TWFREHWFHR NQDQETFDVN DEEDVANLLP DTIDLGIGDE LSIIEAELDD AAFHQSVVAA
101: EALKKGIIDY GFLNDEESMV RNLGLKSPKN AVRPILQSAK YWDKPAQRPN PMGSPRRMIQ QPR
101: EALKKGIIDY GFLNDEESMV RNLGLKSPKN AVRPILQSAK YWDKPAQRPN PMGSPRRMIQ QPR
001: MAMVSGRRST LNPDAPLFIP AAVRQVEDFS PEWWQLVTTS TWYPDYWISQ QQQGADGFYD NGENENGGGH IDVADLLPES FDFDDMEDFF DTDAAEFDQG
101: FDGRMYYQAP SEFGFGKNGE MVKKSSGNRS PRSIVEPAKY AEKPAKWGNQ RVAAAPRNIH QPR
101: FDGRMYYQAP SEFGFGKNGE MVKKSSGNRS PRSIVEPAKY AEKPAKWGNQ RVAAAPRNIH QPR
Arabidopsis Description
ERD15LSR1 [Source:UniProtKB/TrEMBL;Acc:A0A178VWR6]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.