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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 3
  • mitochondrion 4
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400076750 Potato mitochondrion 98.72 98.72
Solyc04g017690.2.1 Tomato mitochondrion, nucleus, plastid 74.36 71.6
KRH66836 Soybean cytosol 35.26 52.38
KRG95151 Soybean cytosol 33.33 50.0
CDY35413 Canola cytosol, mitochondrion 46.15 49.32
CDY22525 Canola cytosol, mitochondrion 44.87 47.95
Bra016934.1-P Field mustard mitochondrion 46.79 46.5
CDY06923 Canola mitochondrion 46.79 46.5
CDY14771 Canola mitochondrion 46.79 46.5
Bra000227.1-P Field mustard nucleus 36.54 45.97
AT2G41430.4 Thale cress mitochondrion 44.87 42.94
Solyc06g050700.2.1 Tomato nucleus 19.87 41.89
VIT_08s0007g05880.t01 Wine grape cytosol 52.56 39.42
GSMUA_Achr8P29540_001 Banana cytosol 39.1 37.42
Zm00001d022416_P001 Maize cytosol 26.92 37.17
GSMUA_Achr1P11430_001 Banana cytosol, extracellular 38.46 36.81
TraesCS1B01G136700.2 Wheat cytosol 32.05 36.23
TraesCS1D01G117900.1 Wheat cytosol 31.41 35.51
TraesCS1A01G116700.1 Wheat cytosol 28.21 33.85
KXG39364 Sorghum nucleus 32.05 33.78
TraesCS4B01G239000.1 Wheat cytosol 26.92 33.33
TraesCS2D01G129500.1 Wheat cytosol 32.05 32.05
TraesCS2A01G127100.1 Wheat cytosol 30.77 30.77
Os03t0353400-01 Rice cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole 31.41 30.62
Os07t0661400-01 Rice plastid 30.13 30.52
EER99855 Sorghum cytosol 30.13 28.48
Zm00001d007097_P001 Maize cytosol, plastid 28.85 28.3
Zm00001d048165_P002 Maize cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole 27.56 26.38
TraesCS2B01G148900.1 Wheat cytosol 31.41 26.2
Zm00001d047470_P005 Maize plastid 28.85 26.01
Protein Annotations
EMBL:AF261139EnsemblPlants:Solyc10g079820.1.1EnsemblPlantsGene:Solyc10g079820.1InterPro:Ataxin-2_CPANTHER:PTHR33790PANTHER:PTHR33790:SF1
PFAM:PF07145UniParc:UPI00000A1929UniProt:Q9LKW3MapMan:35.1::
Description
Dehydration-induced protein ERD15 [Source:UniProtKB/TrEMBL;Acc:Q9LKW3]
Coordinates
chr10:+:61312127..61312908
Molecular Weight (calculated)
17630.5 Da
IEP (calculated)
4.216
GRAVY (calculated)
-0.554
Length
156 amino acids
Sequence
(BLAST)
001: MALVSGGRST LNPNAPLFVP SFVRQVEDFS PEWWNLVTTS TWFHDYWMSQ NQGEEYGAGN DVADLLPENI DLNVDEDILN MEAQFEEFLQ SSENEQQGIK
101: SSLYGVNAMP QYGLPSDALI RTLSSPRSPI GPPKYFEKPS KIVSPRNSFR SIQQPR
Best Arabidopsis Sequence Match ( AT2G41430.5 )
(BLAST)
001: MAMVSGRRST LNPDAPLFIP AAVRQVEDFS PEWWQLVTTS TWYPDYWISQ QQQGADGFYD NGENENGGGH IDVADLLPES FDFDDMEDFF DTDAAEFDQG
101: FDGRMYYQAP SEFGFGKNGE MVKKSSGNRS PRSIVEPAKY AEKPAKWGNQ RVAAAPRNIH QPR
Arabidopsis Description
ERD15LSR1 [Source:UniProtKB/TrEMBL;Acc:A0A178VWR6]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.