Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0353400-01 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 63.51 | 58.75 |
| TraesCS1B01G136700.2 | Wheat | cytosol | 54.73 | 58.7 |
| TraesCS1D01G117900.1 | Wheat | cytosol | 54.05 | 57.97 |
| Zm00001d047470_P005 | Maize | plastid | 67.57 | 57.8 |
| TraesCS4B01G239000.1 | Wheat | cytosol | 47.97 | 56.35 |
| TraesCS1A01G116700.1 | Wheat | cytosol | 47.97 | 54.62 |
| EER99855 | Sorghum | cytosol | 45.27 | 40.61 |
| CDY22525 | Canola | cytosol, mitochondrion | 38.51 | 39.04 |
| CDY35413 | Canola | cytosol, mitochondrion | 34.46 | 34.93 |
| GSMUA_Achr1P11430_001 | Banana | cytosol, extracellular | 37.84 | 34.36 |
| GSMUA_Achr8P29540_001 | Banana | cytosol | 37.84 | 34.36 |
| Solyc04g017690.2.1 | Tomato | mitochondrion, nucleus, plastid | 37.16 | 33.95 |
| Bra000227.1-P | Field mustard | nucleus | 27.7 | 33.06 |
| KRH62868 | Soybean | cytosol, mitochondrion, nucleus, plastid | 36.49 | 32.53 |
| KRH66836 | Soybean | cytosol | 22.97 | 32.38 |
| Solyc10g079820.1.1 | Tomato | mitochondrion | 33.78 | 32.05 |
| PGSC0003DMT400019731 | Potato | cytosol, mitochondrion, plastid | 35.81 | 31.74 |
| KRG95151 | Soybean | cytosol | 22.3 | 31.73 |
| PGSC0003DMT400076750 | Potato | mitochondrion | 33.11 | 31.41 |
| VIT_13s0019g01660.t01 | Wine grape | mitochondrion | 36.49 | 31.4 |
| AT2G41430.4 | Thale cress | mitochondrion | 34.46 | 31.29 |
| CDY14771 | Canola | mitochondrion | 32.43 | 30.57 |
| CDY06923 | Canola | mitochondrion | 32.43 | 30.57 |
| Bra016934.1-P | Field mustard | mitochondrion | 32.43 | 30.57 |
| KRH29966 | Soybean | cytosol, mitochondrion, nucleus, plastid | 34.46 | 30.0 |
| VIT_08s0007g05880.t01 | Wine grape | cytosol | 37.16 | 26.44 |
Protein Annotations
| EnsemblPlants:KXG39364 | EnsemblPlantsGene:SORBI_3001G370600 | PANTHER:PTHR33790 | PANTHER:PTHR33790:SF2 | ProteinID:KXG39364 | ProteinID:KXG39364.1 |
| ProteinID:KXG39365.1 | SEG:seg | UniParc:UPI0001FCD6F5 | UniProt:A0A1B6QN72 | MapMan:35.1 | : |
Description
hypothetical protein
Coordinates
chr1:-:65908123..65909557
Molecular Weight (calculated)
16252.9 Da
IEP (calculated)
4.672
GRAVY (calculated)
-0.504
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAVAVSSSS SLNPDAPLFI PAALLQVEDF SPQWWDLITT TAWFRDHWSR EHAHLDEMAE QLDAAGLLPD EEDLFYDDQL EQAPAAVDPA PAAAVLKTDE
101: VLKALNLTSP KGGDAPRGFR EKPRHSEKPT KYAGSPKSSA PRVIHQPR
101: VLKALNLTSP KGGDAPRGFR EKPRHSEKPT KYAGSPKSSA PRVIHQPR
001: MAMVSGRRST LNPDAPLFIP AAVRQVEDFS PEWWQLVTTS TWYPDYWISQ QQQGADGFYD NGENENGGGH IDVADLLPES FDFDDMEDFF DTDAAEFDQG
101: FDGRMYYQAP SEFGFGKNGE MVKKSSGNRS PRSIVEPAKY AEKPAKWGNQ RVAAAPRNIH QPR
101: FDGRMYYQAP SEFGFGKNGE MVKKSSGNRS PRSIVEPAKY AEKPAKWGNQ RVAAAPRNIH QPR
Arabidopsis Description
ERD15LSR1 [Source:UniProtKB/TrEMBL;Acc:A0A178VWR6]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.