CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 2
plasma membrane 1
extracellular 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG95151	Soybean	cytosol	96.19	97.12
Bra000227.1-P	Field mustard	nucleus	57.14	48.39
CDY22525	Canola	cytosol, mitochondrion	57.14	41.1
CDY35413	Canola	cytosol, mitochondrion	57.14	41.1
CDY06923	Canola	mitochondrion	56.19	37.58
CDY14771	Canola	mitochondrion	56.19	37.58
Bra016934.1-P	Field mustard	mitochondrion	56.19	37.58
AT2G41430.4	Thale cress	mitochondrion	56.19	36.2
Solyc04g017690.2.1	Tomato	mitochondrion, nucleus, plastid	55.24	35.8
Solyc10g079820.1.1	Tomato	mitochondrion	52.38	35.26
PGSC0003DMT400076750	Potato	mitochondrion	52.38	35.26
PGSC0003DMT400019731	Potato	cytosol, mitochondrion, plastid	52.38	32.93
Zm00001d022416_P001	Maize	cytosol	35.24	32.74
VIT_08s0007g05880.t01	Wine grape	cytosol	59.05	29.81
KRH62868	Soybean	cytosol, mitochondrion, nucleus, plastid	44.76	28.31
GSMUA_Achr8P29540_001	Banana	cytosol	43.81	28.22
GSMUA_Achr1P11430_001	Banana	cytosol, extracellular	40.95	26.38
KRH29966	Soybean	cytosol, mitochondrion, nucleus, plastid	41.9	25.88
EER99855	Sorghum	cytosol	39.05	24.85
KRH73235	Soybean	cytosol	29.52	24.8
Os07t0661400-01	Rice	plastid	36.19	24.68
KRH14891	Soybean	cytosol	28.57	24.0
Zm00001d048165_P002	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	37.14	23.93
TraesCS4B01G239000.1	Wheat	cytosol	28.57	23.81
Zm00001d007097_P001	Maize	cytosol, plastid	35.24	23.27
KXG39364	Sorghum	nucleus	32.38	22.97
Os03t0353400-01	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	34.29	22.5
TraesCS1A01G116700.1	Wheat	cytosol	27.62	22.31
TraesCS2A01G127100.1	Wheat	cytosol	32.38	21.79
TraesCS2D01G129500.1	Wheat	cytosol	32.38	21.79
TraesCS1B01G136700.2	Wheat	cytosol	28.57	21.74
TraesCS1D01G117900.1	Wheat	cytosol	28.57	21.74
TraesCS2B01G148900.1	Wheat	cytosol	32.38	18.18
Zm00001d047470_P005	Maize	plastid	27.62	16.76

Protein Annotations

EMBL:ACUP02002014	EnsemblPlants:KRH66836	EnsemblPlantsGene:GLYMA_03G131900	EntrezGene:100794414	PANTHER:PTHR33790	PANTHER:PTHR33790:SF1
ProteinID:KRH66836	ProteinID:KRH66836.1	UniParc:UPI0002339EB3	UniProt:K7KER8	MapMan:35.1	:

Description

hypothetical protein

Coordinates

chr3:+:34685744..34687483

Molecular Weight (calculated)

11896.4 Da

IEP (calculated)

3.608

GRAVY (calculated)

-0.521

Length

105 amino acids

Sequence
(BLAST)

001: MALVSGGRST LNPNAPLYIP AAFRQVEDFS PEWWQLVTTL TWYHDYWLSQ QHDEGAFYGE DDGFDGNDVV DLLPDSFDLD AGEDLFEEFI RSSESQEETG
101: PKVTA

Best Arabidopsis Sequence Match ( AT2G41430.5 )
(BLAST)

001: MAMVSGRRST LNPDAPLFIP AAVRQVEDFS PEWWQLVTTS TWYPDYWISQ QQQGADGFYD NGENENGGGH IDVADLLPES FDFDDMEDFF DTDAAEFDQG
101: FDGRMYYQAP SEFGFGKNGE MVKKSSGNRS PRSIVEPAKY AEKPAKWGNQ RVAAAPRNIH QPR

Arabidopsis Description

ERD15LSR1 [Source:UniProtKB/TrEMBL;Acc:A0A178VWR6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.