Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G136700.2 | Wheat | cytosol | 97.1 | 97.1 |
| TraesCS1A01G116700.1 | Wheat | cytosol | 79.71 | 84.62 |
| TraesCS4B01G239000.1 | Wheat | cytosol | 73.91 | 80.95 |
| Os03t0353400-01 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 68.12 | 58.75 |
| KXG39364 | Sorghum | nucleus | 57.97 | 54.05 |
| TraesCS2D01G129500.1 | Wheat | cytosol | 47.83 | 42.31 |
| Zm00001d047470_P005 | Maize | plastid | 49.28 | 39.31 |
| CDY35413 | Canola | cytosol, mitochondrion | 39.13 | 36.99 |
| CDY22525 | Canola | cytosol, mitochondrion | 37.68 | 35.62 |
| Bra016934.1-P | Field mustard | mitochondrion | 39.13 | 34.39 |
| CDY06923 | Canola | mitochondrion | 39.13 | 34.39 |
| CDY14771 | Canola | mitochondrion | 39.13 | 34.39 |
| AT2G41430.4 | Thale cress | mitochondrion | 38.41 | 32.52 |
| GSMUA_Achr8P29540_001 | Banana | cytosol | 38.41 | 32.52 |
| Solyc04g017690.2.1 | Tomato | mitochondrion, nucleus, plastid | 37.68 | 32.1 |
| Solyc10g079820.1.1 | Tomato | mitochondrion | 35.51 | 31.41 |
| PGSC0003DMT400076750 | Potato | mitochondrion | 34.78 | 30.77 |
| GSMUA_Achr1P11430_001 | Banana | cytosol, extracellular | 36.23 | 30.67 |
| KRH62868 | Soybean | cytosol, mitochondrion, nucleus, plastid | 36.23 | 30.12 |
| KRG95151 | Soybean | cytosol | 22.46 | 29.81 |
| KRH29966 | Soybean | cytosol, mitochondrion, nucleus, plastid | 36.23 | 29.41 |
| PGSC0003DMT400019731 | Potato | cytosol, mitochondrion, plastid | 35.51 | 29.34 |
| Bra000227.1-P | Field mustard | nucleus | 26.09 | 29.03 |
| KRH66836 | Soybean | cytosol | 21.74 | 28.57 |
| VIT_13s0019g01660.t01 | Wine grape | mitochondrion | 35.51 | 28.49 |
| Zm00001d048165_P002 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 31.88 | 26.99 |
| VIT_08s0007g05880.t01 | Wine grape | cytosol | 36.96 | 24.52 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G117900.1 | EnsemblPlantsGene:TraesCS1D01G117900 | PANTHER:PTHR33790 | PANTHER:PTHR33790:SF2 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr1D:+:114020400..114021388
Molecular Weight (calculated)
15166.8 Da
IEP (calculated)
5.574
GRAVY (calculated)
-0.425
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAMVASSLN PEAPLFIPAA LQQVEDFSPL WWDLVKSTAW FRDHWYHQHQ QLDDMADSLI AFEAEDAIAV EASQPQPQPP AALNIDGVLK ALSLASPSPK
101: GGDALRGFSE KPRYTEKPTK YAGSPRSGGA PRFIHQPR
101: GGDALRGFSE KPRYTEKPTK YAGSPRSGGA PRFIHQPR
001: MAMVSGRRST LNPDAPLFIP AAVRQVEDFS PEWWQLVTTS TWYPDYWISQ QQQGADGFYD NGENENGGGH IDVADLLPES FDFDDMEDFF DTDAAEFDQG
101: FDGRMYYQAP SEFGFGKNGE MVKKSSGNRS PRSIVEPAKY AEKPAKWGNQ RVAAAPRNIH QPR
101: FDGRMYYQAP SEFGFGKNGE MVKKSSGNRS PRSIVEPAKY AEKPAKWGNQ RVAAAPRNIH QPR
Arabidopsis Description
ERD15LSR1 [Source:UniProtKB/TrEMBL;Acc:A0A178VWR6]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.