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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 2
  • mitochondrion 4
  • extracellular 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra016934.1-P Field mustard mitochondrion 100.0 100.0
CDY14771 Canola mitochondrion 99.36 99.36
CDY35413 Canola cytosol, mitochondrion 78.34 84.25
CDY22525 Canola cytosol, mitochondrion 71.34 76.71
AT2G41430.4 Thale cress mitochondrion 74.52 71.78
KRG95151 Soybean cytosol 38.85 58.65
KRH66836 Soybean cytosol 37.58 56.19
Solyc10g079820.1.1 Tomato mitochondrion 46.5 46.79
Solyc04g017690.2.1 Tomato mitochondrion, nucleus, plastid 47.77 46.3
PGSC0003DMT400076750 Potato mitochondrion 45.86 46.15
PGSC0003DMT400019731 Potato cytosol, mitochondrion, plastid 46.5 43.71
TraesCS1B01G136700.2 Wheat cytosol 35.03 39.86
Zm00001d022416_P001 Maize cytosol 28.66 39.82
TraesCS1A01G116700.1 Wheat cytosol 32.48 39.23
TraesCS1D01G117900.1 Wheat cytosol 34.39 39.13
GSMUA_Achr1P11430_001 Banana cytosol, extracellular 37.58 36.2
VIT_08s0007g05880.t01 Wine grape cytosol 47.77 36.06
TraesCS4B01G239000.1 Wheat cytosol 28.66 35.71
TraesCS2D01G129500.1 Wheat cytosol 35.03 35.26
Os07t0661400-01 Rice plastid 34.39 35.06
EER99855 Sorghum cytosol 36.31 34.55
Os03t0353400-01 Rice cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole 35.03 34.38
GSMUA_Achr8P29540_001 Banana cytosol 35.67 34.36
TraesCS2A01G127100.1 Wheat cytosol 33.76 33.97
Zm00001d007097_P001 Maize cytosol, plastid 33.76 33.33
CDY01210 Canola cytosol 28.66 32.61
KXG39364 Sorghum nucleus 30.57 32.43
CDY12749 Canola cytosol 28.03 31.21
CDY01209 Canola cytosol 28.03 31.21
TraesCS2B01G148900.1 Wheat cytosol 33.12 27.81
Zm00001d047470_P005 Maize plastid 28.03 25.43
Zm00001d048165_P002 Maize cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole 25.48 24.54
Protein Annotations
EnsemblPlants:CDY06923EnsemblPlantsGene:GSBRNA2T00123218001InterPro:Ataxin-2_CPANTHER:PTHR33790PANTHER:PTHR33790:SF1PFAM:PF07145
ProteinID:CDY06923ProteinID:CDY06923.1SEG:segUniParc:UPI00015D98C7MapMan:35.1:
Description
BnaA04g23920D
Coordinates
chrLK031974:-:207840..209337
Molecular Weight (calculated)
17829.4 Da
IEP (calculated)
4.680
GRAVY (calculated)
-0.790
Length
157 amino acids
Sequence
(BLAST)
001: MAMVSGRRST LNPNAPLFVP AAVRQVEDFS PEWWQLVTTS TWYHDYWISQ HQGADGFYDN GESQEVDVAD LLPESFDFDD IEDVFESEFD HQGYGGYVGQ
101: QMYHAPSDFG LGKNGEMVRK SSGNRSPRSI VEPAKYAEKP AKWGNQKVAP RNIHQPR
Best Arabidopsis Sequence Match ( AT2G41430.5 )
(BLAST)
001: MAMVSGRRST LNPDAPLFIP AAVRQVEDFS PEWWQLVTTS TWYPDYWISQ QQQGADGFYD NGENENGGGH IDVADLLPES FDFDDMEDFF DTDAAEFDQG
101: FDGRMYYQAP SEFGFGKNGE MVKKSSGNRS PRSIVEPAKY AEKPAKWGNQ RVAAAPRNIH QPR
Arabidopsis Description
ERD15LSR1 [Source:UniProtKB/TrEMBL;Acc:A0A178VWR6]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.