Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G117900.1 | Wheat | cytosol | 84.62 | 79.71 |
| TraesCS1B01G136700.2 | Wheat | cytosol | 83.85 | 78.99 |
| TraesCS4B01G239000.1 | Wheat | cytosol | 66.92 | 69.05 |
| Os03t0353400-01 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 66.15 | 53.75 |
| KXG39364 | Sorghum | nucleus | 54.62 | 47.97 |
| TraesCS2A01G127100.1 | Wheat | cytosol | 50.0 | 41.67 |
| Zm00001d047470_P005 | Maize | plastid | 49.23 | 36.99 |
| CDY22525 | Canola | cytosol, mitochondrion | 39.23 | 34.93 |
| CDY35413 | Canola | cytosol, mitochondrion | 38.46 | 34.25 |
| AT2G41430.4 | Thale cress | mitochondrion | 40.77 | 32.52 |
| CDY14771 | Canola | mitochondrion | 39.23 | 32.48 |
| CDY06923 | Canola | mitochondrion | 39.23 | 32.48 |
| Bra016934.1-P | Field mustard | mitochondrion | 39.23 | 32.48 |
| KRH62868 | Soybean | cytosol, mitochondrion, nucleus, plastid | 39.23 | 30.72 |
| GSMUA_Achr8P29540_001 | Banana | cytosol | 38.46 | 30.67 |
| Solyc04g017690.2.1 | Tomato | mitochondrion, nucleus, plastid | 36.92 | 29.63 |
| KRH29966 | Soybean | cytosol, mitochondrion, nucleus, plastid | 38.46 | 29.41 |
| Bra000227.1-P | Field mustard | nucleus | 26.92 | 28.23 |
| GSMUA_Achr1P11430_001 | Banana | cytosol, extracellular | 35.38 | 28.22 |
| Solyc10g079820.1.1 | Tomato | mitochondrion | 33.85 | 28.21 |
| PGSC0003DMT400076750 | Potato | mitochondrion | 33.85 | 28.21 |
| PGSC0003DMT400019731 | Potato | cytosol, mitochondrion, plastid | 36.15 | 28.14 |
| VIT_13s0019g01660.t01 | Wine grape | mitochondrion | 36.92 | 27.91 |
| KRG95151 | Soybean | cytosol | 22.31 | 27.88 |
| KRH66836 | Soybean | cytosol | 22.31 | 27.62 |
| Zm00001d048165_P002 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 31.54 | 25.15 |
| VIT_08s0007g05880.t01 | Wine grape | cytosol | 36.92 | 23.08 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G116700.1 | EnsemblPlantsGene:TraesCS1A01G116700 | PANTHER:PTHR33790 | PANTHER:PTHR33790:SF2 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr1A:+:124011291..124011803
Molecular Weight (calculated)
14342.9 Da
IEP (calculated)
6.091
GRAVY (calculated)
-0.463
Length
130 amino acids
Sequence
(BLAST)
(BLAST)
001: MVASSLNPEA PLFIPAAFQQ VEDFSPQWWD LVKSTAWFRD HWYHQHQQLD DMVDSLMALE AEDAIAVEAS QPQPPAALKI GADGVLKALS LASPSPKGGF
101: SEKPRYTEKP TKYAGSPRSG GAPRFIHQPR
101: SEKPRYTEKP TKYAGSPRSG GAPRFIHQPR
001: MAMVSGRRST LNPDAPLFIP AAVRQVEDFS PEWWQLVTTS TWYPDYWISQ QQQGADGFYD NGENENGGGH IDVADLLPES FDFDDMEDFF DTDAAEFDQG
101: FDGRMYYQAP SEFGFGKNGE MVKKSSGNRS PRSIVEPAKY AEKPAKWGNQ RVAAAPRNIH QPR
101: FDGRMYYQAP SEFGFGKNGE MVKKSSGNRS PRSIVEPAKY AEKPAKWGNQ RVAAAPRNIH QPR
Arabidopsis Description
ERD15LSR1 [Source:UniProtKB/TrEMBL;Acc:A0A178VWR6]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.