Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G136700.2 | Wheat | cytosol | 80.95 | 73.91 |
| TraesCS1D01G117900.1 | Wheat | cytosol | 80.95 | 73.91 |
| TraesCS1A01G116700.1 | Wheat | cytosol | 69.05 | 66.92 |
| Os03t0353400-01 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 61.9 | 48.75 |
| KXG39364 | Sorghum | nucleus | 56.35 | 47.97 |
| Zm00001d047470_P005 | Maize | plastid | 48.41 | 35.26 |
| TraesCS2B01G148900.1 | Wheat | cytosol | 46.03 | 31.02 |
| GSMUA_Achr8P29540_001 | Banana | cytosol | 39.68 | 30.67 |
| CDY22525 | Canola | cytosol, mitochondrion | 34.13 | 29.45 |
| CDY35413 | Canola | cytosol, mitochondrion | 34.13 | 29.45 |
| KRG95151 | Soybean | cytosol | 23.81 | 28.85 |
| CDY14771 | Canola | mitochondrion | 35.71 | 28.66 |
| CDY06923 | Canola | mitochondrion | 35.71 | 28.66 |
| Bra016934.1-P | Field mustard | mitochondrion | 35.71 | 28.66 |
| KRH66836 | Soybean | cytosol | 23.81 | 28.57 |
| Solyc04g017690.2.1 | Tomato | mitochondrion, nucleus, plastid | 35.71 | 27.78 |
| KRH62868 | Soybean | cytosol, mitochondrion, nucleus, plastid | 36.51 | 27.71 |
| Zm00001d048165_P002 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 35.71 | 27.61 |
| GSMUA_Achr1P11430_001 | Banana | cytosol, extracellular | 35.71 | 27.61 |
| Bra000227.1-P | Field mustard | nucleus | 26.98 | 27.42 |
| Solyc10g079820.1.1 | Tomato | mitochondrion | 33.33 | 26.92 |
| KRH29966 | Soybean | cytosol, mitochondrion, nucleus, plastid | 35.71 | 26.47 |
| AT2G41430.4 | Thale cress | mitochondrion | 34.13 | 26.38 |
| PGSC0003DMT400076750 | Potato | mitochondrion | 32.54 | 26.28 |
| VIT_13s0019g01660.t01 | Wine grape | mitochondrion | 35.71 | 26.16 |
| PGSC0003DMT400019731 | Potato | cytosol, mitochondrion, plastid | 34.13 | 25.75 |
| VIT_08s0007g05880.t01 | Wine grape | cytosol | 36.51 | 22.12 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G239000.1 | EnsemblPlantsGene:TraesCS4B01G239000 | PANTHER:PTHR33790 | PANTHER:PTHR33790:SF2 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr4B:+:496241828..496243194
Molecular Weight (calculated)
13993.3 Da
IEP (calculated)
4.437
GRAVY (calculated)
-0.376
Length
126 amino acids
Sequence
(BLAST)
(BLAST)
001: MSAMVASSLN PEAPLFIPAA FQQVEDFSPQ WWDLVKSTAW FRDHWYHQHQ QLDDMADSLI AFEAEDAIDD DLLHGFAVEA SQPQPPAALK TDGVLKALSL
101: ASPSPKVGDA LRVSSEKPRY TEKPTK
101: ASPSPKVGDA LRVSSEKPRY TEKPTK
001: MAMVSGRRST LNPDAPLFIP AAVRQVEDFS PEWWQLVTTS TWYPDYWISQ QQQGADGFYD NGENENGGGH IDVADLLPES FDFDDMEDFF DTDAAEFDQG
101: FDGRMYYQAP SEFGKSVSFP
101: FDGRMYYQAP SEFGKSVSFP
Arabidopsis Description
ERD15LSR1 [Source:UniProtKB/TrEMBL;Acc:A0A178VWR6]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.