CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22525	Canola	cytosol, mitochondrion	86.99	86.99
CDY06923	Canola	mitochondrion	84.25	78.34
CDY14771	Canola	mitochondrion	84.25	78.34
Bra000227.1-P	Field mustard	nucleus	61.64	72.58
AT2G41430.4	Thale cress	mitochondrion	76.03	68.1
KRG95151	Soybean	cytosol	41.78	58.65
KRH66836	Soybean	cytosol	41.1	57.14
Solyc10g079820.1.1	Tomato	mitochondrion	49.32	46.15
PGSC0003DMT400076750	Potato	mitochondrion	48.63	45.51
Solyc04g017690.2.1	Tomato	mitochondrion, nucleus, plastid	49.32	44.44
PGSC0003DMT400019731	Potato	cytosol, mitochondrion, plastid	48.63	42.52
TraesCS1B01G136700.2	Wheat	cytosol	37.67	39.86
TraesCS1D01G117900.1	Wheat	cytosol	36.99	39.13
Zm00001d022416_P001	Maize	cytosol	30.14	38.94
TraesCS1A01G116700.1	Wheat	cytosol	34.25	38.46
Os03t0353400-01	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	38.36	35.0
TraesCS2D01G129500.1	Wheat	cytosol	36.99	34.62
EER99855	Sorghum	cytosol	39.04	34.55
KXG39364	Sorghum	nucleus	34.93	34.46
VIT_08s0007g05880.t01	Wine grape	cytosol	48.63	34.13
TraesCS4B01G239000.1	Wheat	cytosol	29.45	34.13
TraesCS2A01G127100.1	Wheat	cytosol	36.3	33.97
GSMUA_Achr1P11430_001	Banana	cytosol, extracellular	37.67	33.74
GSMUA_Achr8P29540_001	Banana	cytosol	36.99	33.13
Os07t0661400-01	Rice	plastid	34.93	33.12
Zm00001d007097_P001	Maize	cytosol, plastid	34.93	32.08
CDY01210	Canola	cytosol	30.14	31.88
CDY01209	Canola	cytosol	29.45	30.5
CDY12749	Canola	cytosol	29.45	30.5
TraesCS2B01G148900.1	Wheat	cytosol	35.62	27.81
Zm00001d048165_P002	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	30.14	26.99
Zm00001d047470_P005	Maize	plastid	30.14	25.43

Protein Annotations

EnsemblPlants:CDY35413	EnsemblPlantsGene:GSBRNA2T00058402001	PANTHER:PTHR33790	PANTHER:PTHR33790:SF1	ProteinID:CDY35413	ProteinID:CDY35413.1
UniParc:UPI0004EE8AD0	UniProt:A0A078HF36	MapMan:35.1	:	:	:

Description

BnaA03g19470DBnaA03g19470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HF36]

Coordinates

chrLK032351:-:234825..235822

Molecular Weight (calculated)

16591.1 Da

IEP (calculated)

4.482

GRAVY (calculated)

-0.644

Length

146 amino acids

Sequence
(BLAST)

001: MAMVSGRRST LNPDAPLFVP AAVRQVEDFS PEWWQLVTTS TWYHDYWISQ HQGADGFYDG EVDVADLLPE SFDFDDMEDL FEADEFGGEI YHAPSDFGLG
101: KNGEMVRRSS GNRSPRLVVE PAKYAEKPAK WANQRVAAPR NIHQPR

Best Arabidopsis Sequence Match ( AT2G41430.5 )
(BLAST)

001: MAMVSGRRST LNPDAPLFIP AAVRQVEDFS PEWWQLVTTS TWYPDYWISQ QQQGADGFYD NGENENGGGH IDVADLLPES FDFDDMEDFF DTDAAEFDQG
101: FDGRMYYQAP SEFGFGKNGE MVKKSSGNRS PRSIVEPAKY AEKPAKWGNQ RVAAAPRNIH QPR

Arabidopsis Description

ERD15LSR1 [Source:UniProtKB/TrEMBL;Acc:A0A178VWR6]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.