Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G129500.1 | Wheat | cytosol | 96.79 | 96.79 |
| TraesCS2B01G148900.1 | Wheat | cytosol | 94.23 | 78.61 |
| Os07t0661400-01 | Rice | plastid | 62.82 | 63.64 |
| Zm00001d022416_P001 | Maize | cytosol | 42.31 | 58.41 |
| EER99855 | Sorghum | cytosol | 61.54 | 58.18 |
| Zm00001d007097_P001 | Maize | cytosol, plastid | 53.85 | 52.83 |
| TraesCS1A01G116700.1 | Wheat | cytosol | 41.67 | 50.0 |
| GSMUA_Achr8P29540_001 | Banana | cytosol | 41.03 | 39.26 |
| CDY22525 | Canola | cytosol, mitochondrion | 35.9 | 38.36 |
| CDY35413 | Canola | cytosol, mitochondrion | 33.97 | 36.3 |
| AT2G41430.4 | Thale cress | mitochondrion | 36.54 | 34.97 |
| VIT_13s0019g01660.t01 | Wine grape | mitochondrion | 37.82 | 34.3 |
| CDY14771 | Canola | mitochondrion | 33.97 | 33.76 |
| CDY06923 | Canola | mitochondrion | 33.97 | 33.76 |
| Bra016934.1-P | Field mustard | mitochondrion | 33.97 | 33.76 |
| Solyc04g017690.2.1 | Tomato | mitochondrion, nucleus, plastid | 34.62 | 33.33 |
| GSMUA_Achr1P11430_001 | Banana | cytosol, extracellular | 34.62 | 33.13 |
| KRH29966 | Soybean | cytosol, mitochondrion, nucleus, plastid | 35.9 | 32.94 |
| KRH66836 | Soybean | cytosol | 21.79 | 32.38 |
| KRH62868 | Soybean | cytosol, mitochondrion, nucleus, plastid | 33.97 | 31.93 |
| KRG95151 | Soybean | cytosol | 21.15 | 31.73 |
| Solyc10g079820.1.1 | Tomato | mitochondrion | 30.77 | 30.77 |
| PGSC0003DMT400019731 | Potato | cytosol, mitochondrion, plastid | 32.69 | 30.54 |
| PGSC0003DMT400076750 | Potato | mitochondrion | 30.13 | 30.13 |
| Bra000227.1-P | Field mustard | nucleus | 23.72 | 29.84 |
| VIT_08s0007g05880.t01 | Wine grape | cytosol | 30.77 | 23.08 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G127100.1 | EnsemblPlantsGene:TraesCS2A01G127100 | PANTHER:PTHR33790 | PANTHER:PTHR33790:SF1 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr2A:+:75134820..75135811
Molecular Weight (calculated)
17343.3 Da
IEP (calculated)
4.766
GRAVY (calculated)
-0.542
Length
156 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTMAMSALN PDAPMFIPAA FKKVEDYSPE WWELVKTTAW FRDHWFRQHQ LYEDLADDVD VDDVAALLPD DSVDLLDADD LFYSPPSPQP QPDFYHYKPA
101: GFGGDMDAVL KTLSVNSPRG GGPAPAWAPM RHAEKPAQHV GPRAGGGARR AIHQPR
101: GFGGDMDAVL KTLSVNSPRG GGPAPAWAPM RHAEKPAQHV GPRAGGGARR AIHQPR
001: MAMVSGRRST LNPDAPLFIP AAVRQVEDFS PEWWQLVTTS TWYPDYWISQ QQQGADGFYD NGENENGGGH IDVADLLPES FDFDDMEDFF DTDAAEFDQG
101: FDGRMYYQAP SEFGFGKNGE MVKKSSGNRS PRSIVEPAKY AEKPAKWGNQ RVAAAPRNIH QPR
101: FDGRMYYQAP SEFGFGKNGE MVKKSSGNRS PRSIVEPAKY AEKPAKWGNQ RVAAAPRNIH QPR
Arabidopsis Description
ERD15LSR1 [Source:UniProtKB/TrEMBL;Acc:A0A178VWR6]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.