Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13490 | Canola | cytosol | 100.0 | 11.43 |
| CDX73945 | Canola | nucleus | 91.67 | 11.22 |
| CDY15071 | Canola | nucleus | 91.67 | 10.48 |
| CDY26394 | Canola | cytosol | 91.67 | 8.8 |
| CDY00649 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 75.0 | 4.5 |
| CDY29558 | Canola | cytosol, plastid, vacuole | 25.0 | 3.45 |
| CDY58656 | Canola | nucleus | 33.33 | 2.27 |
| CDY22172 | Canola | nucleus | 33.33 | 2.21 |
| AT5G01570.1 | Thale cress | cytosol, nucleus, plastid | 25.0 | 1.42 |
Protein Annotations
| EnsemblPlants:CDY29557 | EnsemblPlantsGene:GSBRNA2T00043270001 | ProteinID:CDY29557 | ProteinID:CDY29557.1 | UniParc:UPI0004EDC359 | UniProt:A0A078GWL9 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA03g54020DBnaA03g54020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GWL9]
Coordinates
chrLK032239:+:187951..187989
Molecular Weight (calculated)
1476.8 Da
IEP (calculated)
4.148
GRAVY (calculated)
-1.058
Length
12 amino acids
Sequence
(BLAST)
(BLAST)
1: MELESKINDE LR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.