CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU83426	Sorghum	extracellular	54.41	49.66
PGSC0003DMT400050024	Potato	cytosol	44.85	49.19
EES08758	Sorghum	extracellular	52.21	47.65
EES08760	Sorghum	extracellular	50.74	45.7
EES08759	Sorghum	extracellular	50.0	45.03
Solyc01g097240.2.1	Tomato	extracellular	44.85	42.66
KRG92685	Soybean	extracellular	42.65	38.67

Protein Annotations

Gene3D:2.40.40.10	MapMan:35.1	InterPro:Barwin_CS	InterPro:Barwin_dom	UniProt:C5Y4T4	EnsemblPlants:EES08702
ProteinID:EES08702	ProteinID:EES08702.1	GO:GO:0006950	GO:GO:0008150	GO:GO:0009605	GO:GO:0009607
GO:GO:0042742	GO:GO:0050832	InterPro:IPR001153	InterPro:IPR036908	PFAM:PD004535	PFAM:PF00967
PRINTS:PR00602	ScanProsite:PS00772	PFscan:PS51174	PANTHER:PTHR22595	PANTHER:PTHR22595:SF59	InterPro:RlpA-like_sf
EnsemblPlantsGene:SORBI_3005G157400	SUPFAM:SSF50685	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A865D0	RefSeq:XP_002449714.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:62950661..62951078

Molecular Weight (calculated)

14021.4 Da

IEP (calculated)

3.705

GRAVY (calculated)

0.335

Length

136 amino acids

Sequence
(BLAST)

001: MAAATGTTTS LSRRLVVVLA AAAAMICLLV GSAAAQQASG VVAMYNQYNP AQVEWDLGAA GAFCATWDAE MPLAWRQCYG WTAFCGGDQA TARVVDECHN
101: GGLDLDAAVF GEIDTDGAGA ASGSLVVDYQ FVDCQD

Best Arabidopsis Sequence Match ( AT3G04720.1 )
(BLAST)

001: MKIRLSITII LLSYTVATVA GQQCGRQGGG RTCPGNICCS QYGYCGTTAD YCSPTNNCQS NCWGSGPSGP GESASNVRAT YHFYNPAQNN WDLRAVSAYC
101: STWDADKPYA WRSKYGWTAF CGPAGPRGQA SCGKCLRVKN TRTNAAVTVR IVDQCSNGGL DLDVAMFNQI DTDGFGYQQG HLIVDYQFVD CGNELIGQPD
201: SRNMLVSAID RV

Arabidopsis Description

HELHevein-like preproprotein [Source:UniProtKB/Swiss-Prot;Acc:P43082]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.