Factsheet for Solyc01g097240.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

extracellular: 22364583
extracellular: 22892874
nucleus: 28394025
extracellular: 29876421

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 22892874 doi

EH Konozy, H Rogniaux, M Causse, M Faurobert

Unité de Génétique et Amélioration des Fruits et Légumes, INRA, BP 94, 84143 Montfavet, France. ehkonozy@yahoo.com

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

msms PMID: 22364583 doi

P Shah, AL Powell, R Orlando, C Bergmann, G Gutierrez-Sanchez

Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400050024	Potato	cytosol	82.52	95.16
KRG92685	Soybean	extracellular	65.73	62.67
TraesCS6D01G311600.1	Wheat	extracellular, plastid	58.04	60.58
TraesCS6A01G332300.1	Wheat	extracellular	60.84	60.0
TraesCS6B01G363100.1	Wheat	extracellular	51.05	58.87
TraesCS6B01G363000.1	Wheat	extracellular	60.14	55.84
OQU83426	Sorghum	extracellular	55.94	53.69
TraesCS6D01G311500.1	Wheat	extracellular	58.04	53.21
TraesCS6A01G332600.1	Wheat	extracellular	57.34	52.56
Zm00001d049214_P001	Maize	extracellular	54.55	52.0
TraesCS6A01G332500.1	Wheat	extracellular	51.75	47.13
EES08702	Sorghum	extracellular	42.66	44.85
Solyc01g097280.2.1	Tomato	extracellular	58.04	41.71
Solyc01g097270.2.1	Tomato	extracellular	60.14	40.57
HORVU6Hr1G080540.1	Barley	extracellular	44.76	36.36
TraesCS6A01G332400.1	Wheat	extracellular	29.37	33.87

Protein Annotations

Gene3D:2.40.40.10	MapMan:35.1	InterPro:Barwin_CS	InterPro:Barwin_dom	GO:GO:0005575	GO:GO:0005576
GO:GO:0005618	GO:GO:0005623	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150	GO:GO:0009605
GO:GO:0009607	GO:GO:0030312	GO:GO:0042742	GO:GO:0050832	InterPro:IPR001153	InterPro:IPR036908
UniProt:P32045	PFAM:PD004535	PFAM:PF00967	PRINTS:PR00602	ScanProsite:PS00771	ScanProsite:PS00772
PFscan:PS51174	PANTHER:PTHR22595	PANTHER:PTHR22595:SF71	InterPro:RlpA-like_sf	SUPFAM:SSF50685	SignalP:SignalP-noTM
EnsemblPlantsGene:Solyc01g097240.2	EnsemblPlants:Solyc01g097240.2.1	TMHMM:TMhelix	UniParc:UPI0000132339	EMBL:X58548	:

Description

Pathogenesis-related protein P2 [Source:UniProtKB/Swiss-Prot;Acc:P32045]

Coordinates

chr1:-:88162152..88163828

Molecular Weight (calculated)

16027.0 Da

IEP (calculated)

8.272

GRAVY (calculated)

-0.292

Length

143 amino acids

Sequence
(BLAST)

001: MERVNKLCVA FFVINMMMAV AAAQSATNVR ATYHLYNPQN INWDLRTASV YCATWDADKP LEWRRRYGWT AFCGPAGPTG QASCGRCLRV TNTGTGTQET
101: VRIVDQCRNG GLDLDVNVFN RLDTNGLGYQ RGNLNVNYEF VNC

Best Arabidopsis Sequence Match ( AT3G04720.1 )
(BLAST)

001: MKIRLSITII LLSYTVATVA GQQCGRQGGG RTCPGNICCS QYGYCGTTAD YCSPTNNCQS NCWGSGPSGP GESASNVRAT YHFYNPAQNN WDLRAVSAYC
101: STWDADKPYA WRSKYGWTAF CGPAGPRGQA SCGKCLRVKN TRTNAAVTVR IVDQCSNGGL DLDVAMFNQI DTDGFGYQQG HLIVDYQFVD CGNELIGQPD
201: SRNMLVSAID RV

Arabidopsis Description

HELHevein-like preproprotein [Source:UniProtKB/Swiss-Prot;Acc:P43082]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.