CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048948_P001	Maize	extracellular, mitochondrion	83.44	82.89
Os11t0592200-01	Rice	extracellular	75.5	78.08
EES08760	Sorghum	extracellular	75.5	75.5
EES08758	Sorghum	extracellular	66.23	67.11
GSMUA_Achr1P23250_001	Banana	extracellular	62.91	66.43
GSMUA_Achr6P01380_001	Banana	extracellular	62.91	65.52
GSMUA_Achr6P01350_001	Banana	extracellular	62.25	64.83
VIT_14s0081g00030.t01	Wine grape	extracellular	60.93	64.34
OQU83426	Sorghum	extracellular	54.3	55.03
EES08702	Sorghum	extracellular	45.03	50.0
VIT_14s0081g00050.t01	Wine grape	extracellular	60.93	46.7

Protein Annotations

Gene3D:2.40.40.10	MapMan:35.1	EntrezGene:8062681	InterPro:Barwin_dom	UniProt:C5Y5D5	EnsemblPlants:EES08759
ProteinID:EES08759	ProteinID:EES08759.1	GO:GO:0006950	GO:GO:0008150	GO:GO:0009605	GO:GO:0009607
GO:GO:0042742	GO:GO:0050832	InterPro:IPR001153	InterPro:IPR036908	PFAM:PD004535	PFAM:PF00967
PRINTS:PR00602	PFscan:PS51174	PANTHER:PTHR22595	PANTHER:PTHR22595:SF59	InterPro:RlpA-like_sf	EnsemblPlantsGene:SORBI_3005G169300
SUPFAM:SSF50685	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A86384	RefSeq:XP_002449771.1	SEG:seg

Description

hypothetical protein

Coordinates

chr5:+:64817956..64818743

Molecular Weight (calculated)

16016.8 Da

IEP (calculated)

8.035

GRAVY (calculated)

-0.106

Length

151 amino acids

Sequence
(BLAST)

001: MAAAAMMITG ARAFTVAALL CAAAAAAAMA QQASNVRATY HLYNPQQNNW NLNAVSAYCA TWDAGKPASW RQQYGWTAFC GPSGPTGQAA CGRCIRVTNR
101: GTGASTTARI VDQCSNGGLD LDFETVFKKI DTDGRGYQMG HLDVDYQFVG C

Best Arabidopsis Sequence Match ( AT3G04720.1 )
(BLAST)

001: MKIRLSITII LLSYTVATVA GQQCGRQGGG RTCPGNICCS QYGYCGTTAD YCSPTNNCQS NCWGSGPSGP GESASNVRAT YHFYNPAQNN WDLRAVSAYC
101: STWDADKPYA WRSKYGWTAF CGPAGPRGQA SCGKCLRVKN TRTNAAVTVR IVDQCSNGGL DLDVAMFNQI DTDGFGYQQG HLIVDYQFVD CGNELIGQPD
201: SRNMLVSAID RV

Arabidopsis Description

HELHevein-like preproprotein [Source:UniProtKB/Swiss-Prot;Acc:P43082]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.