Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 6
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
30448023
|
msms PMID:
30448023
doi
Department of Plant Biology, Faculty of Biology, University of Murcia, Campus de Espinardo, E-30100, Murcia, Spain., Department of Plant Biology, Faculty of Biology, University of Murcia, Campus de Espinardo, E-30100, Murcia, Spain. Electronic address: lorena.almagro@um.es., Plant Proteomics and Functional Genomics Group, Department of Agrochemistry and Biochemistry, Faculty of Science, University of Alicante and Instituto de Investigación Sanitaria y Biomédica de Alicante ISABIAL-FISABIO, Alicante, Spain.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P23250_001 | Banana | extracellular | 76.92 | 76.92 |
| GSMUA_Achr6P01380_001 | Banana | extracellular | 74.13 | 73.1 |
| GSMUA_Achr6P01350_001 | Banana | extracellular | 73.43 | 72.41 |
| TraesCS6B01G446400.1 | Wheat | extracellular | 72.03 | 71.03 |
| TraesCS1B01G366300.2 | Wheat | extracellular | 66.43 | 70.37 |
| TraesCS1D01G355100.1 | Wheat | extracellular | 71.33 | 70.34 |
| TraesCS6D01G386800.1 | Wheat | extracellular | 71.33 | 70.34 |
| TraesCS1A01G355300.1 | Wheat | extracellular | 70.63 | 69.66 |
| TraesCS3B01G584700.1 | Wheat | extracellular | 70.63 | 69.18 |
| HORVU3Hr1G113120.1 | Barley | extracellular | 70.63 | 69.18 |
| TraesCS6A01G403200.1 | Wheat | extracellular | 69.93 | 68.97 |
| TraesCS3A01G517100.1 | Wheat | extracellular | 69.93 | 68.49 |
| Zm00001d048949_P001 | Maize | extracellular | 71.33 | 68.46 |
| Zm00001d048950_P001 | Maize | extracellular | 71.33 | 68.0 |
| HORVU3Hr1G113620.1 | Barley | extracellular | 69.23 | 67.81 |
| TraesCS3D01G524700.1 | Wheat | extracellular | 69.93 | 67.57 |
| Os11t0592000-01 | Rice | extracellular | 70.63 | 67.33 |
| Os11t0592100-01 | Rice | extracellular | 70.63 | 66.45 |
| EES08760 | Sorghum | extracellular | 69.93 | 66.23 |
| TraesCS6B01G446300.1 | Wheat | extracellular | 57.34 | 66.13 |
| EES08758 | Sorghum | extracellular | 68.53 | 65.77 |
| Os11t0592200-01 | Rice | extracellular | 62.24 | 60.96 |
| EES08759 | Sorghum | extracellular | 64.34 | 60.93 |
| TraesCS2B01G582100.1 | Wheat | extracellular | 69.23 | 60.37 |
| TraesCS2D01G552100.1 | Wheat | extracellular | 68.53 | 59.76 |
| TraesCS2B01G581900.1 | Wheat | extracellular | 69.23 | 59.64 |
| HORVU2Hr1G120530.1 | Barley | extracellular | 69.23 | 59.64 |
| Zm00001d048948_P001 | Maize | extracellular, mitochondrion | 62.94 | 59.21 |
| TraesCS2A01G551000.1 | Wheat | extracellular, unclear | 68.53 | 59.04 |
| TraesCS2B01G582000.1 | Wheat | extracellular | 67.83 | 58.43 |
| Os11t0591800-01 | Rice | extracellular | 62.24 | 56.33 |
| VIT_14s0081g00050.t01 | Wine grape | extracellular | 76.22 | 55.33 |
| Zm00001d048947_P001 | Maize | extracellular | 66.43 | 54.29 |
| TraesCS2B01G581800.1 | Wheat | extracellular | 45.45 | 51.59 |
| HORVU6Hr1G092630.3 | Barley | extracellular, plastid | 67.83 | 38.65 |
| VIT_14s0081g00020.t01 | Wine grape | extracellular, mitochondrion, plasma membrane, plastid | 34.27 | 32.24 |
Protein Annotations
| EntrezGene:100255405 | wikigene:100255405 | Gene3D:2.40.40.10 | MapMan:35.1 | ProteinID:AAC33732 | ProteinID:AAC33732.1 |
| EMBL:AF061329 | InterPro:Barwin_CS | InterPro:Barwin_dom | ProteinID:CBI35210 | ProteinID:CBI35210.3 | UniProt:D7TXF5 |
| EMBL:FN596256 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0042742 |
| GO:GO:0050832 | InterPro:IPR001153 | InterPro:IPR036908 | EntrezGene:LOC100255405 | wikigene:LOC100255405 | PFAM:PD004535 |
| PFAM:PF00967 | PRINTS:PR00602 | ScanProsite:PS00771 | ScanProsite:PS00772 | PFscan:PS51174 | PANTHER:PTHR22595 |
| PANTHER:PTHR22595:SF71 | InterPro:RlpA-like_sf | SUPFAM:SSF50685 | SignalP:SignalP-noTM | TIGR:TC58333 | UniParc:UPI00015CCE84 |
| ArrayExpress:VIT_14s0081g00030 | EnsemblPlantsGene:VIT_14s0081g00030 | EnsemblPlants:VIT_14s0081g00030.t01 | unigene:Vvi.6712 | RefSeq:XP_002264720 | RefSeq:XP_002264720.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr14:+:7588347..7588991
Molecular Weight (calculated)
15113.6 Da
IEP (calculated)
7.969
GRAVY (calculated)
-0.122
Length
143 amino acids
Sequence
(BLAST)
(BLAST)
001: MERRGICKVV VLLSLVACAA AQSASNVRAT YHYYNPAQNG WDLNAVSAYC STWDASKPLA WRSKYGWTAF CGPSGPTGQA ACGKCLSVTN TATGTQATVR
101: IVDQCSNGGL DLDSGVFNQL DTNGAGYAKG HLTVNYQFVN CGD
101: IVDQCSNGGL DLDSGVFNQL DTNGAGYAKG HLTVNYQFVN CGD
001: MKIRLSITII LLSYTVATVA GQQCGRQGGG RTCPGNICCS QYGYCGTTAD YCSPTNNCQS NCWGSGPSGP GESASNVRAT YHFYNPAQNN WDLRAVSAYC
101: STWDADKPYA WRSKYGWTAF CGPAGPRGQA SCGKCLRVKN TRTNAAVTVR IVDQCSNGGL DLDVAMFNQI DTDGFGYQQG HLIVDYQFVD CGNELIGQPD
201: SRNMLVSAID RV
101: STWDADKPYA WRSKYGWTAF CGPAGPRGQA SCGKCLRVKN TRTNAAVTVR IVDQCSNGGL DLDVAMFNQI DTDGFGYQQG HLIVDYQFVD CGNELIGQPD
201: SRNMLVSAID RV
Arabidopsis Description
HELHevein-like preproprotein [Source:UniProtKB/Swiss-Prot;Acc:P43082]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.