Factsheet for Zm00001d048947_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES08760	Sorghum	extracellular	70.29	81.46
Zm00001d048948_P001	Maize	extracellular, mitochondrion	66.29	76.32
Os11t0592200-01	Rice	extracellular	63.43	76.03
Zm00001d048949_P001	Maize	extracellular	59.43	69.8
Zm00001d048950_P001	Maize	extracellular	59.43	69.33
VIT_14s0081g00030.t01	Wine grape	extracellular	54.29	66.43
GSMUA_Achr1P23250_001	Banana	extracellular	52.57	64.34
GSMUA_Achr6P01380_001	Banana	extracellular	52.57	63.45
GSMUA_Achr6P01350_001	Banana	extracellular	52.0	62.76
Zm00001d049214_P001	Maize	extracellular	48.0	56.0
VIT_14s0081g00050.t01	Wine grape	extracellular	53.14	47.21

Protein Annotations

Gene3D:2.40.40.10	MapMan:35.1	ProteinID:AQK49229.1	InterPro:Barwin_dom	GO:GO:0006950	GO:GO:0008150
GO:GO:0009605	GO:GO:0009607	GO:GO:0042742	GO:GO:0050832	InterPro:IPR001153	InterPro:IPR036908
UniProt:K7UPV6	PFAM:PD004535	PFAM:PF00967	PRINTS:PR00602	PFscan:PS51174	PANTHER:PTHR22595
PANTHER:PTHR22595:SF59	InterPro:RlpA-like_sf	SUPFAM:SSF50685	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002216AF4
EnsemblPlantsGene:Zm00001d048947	EnsemblPlants:Zm00001d048947_P001	EnsemblPlants:Zm00001d048947_T001	SEG:seg	:	:

Description

pathogenesis-related protein3 pathogenesis-related protein3

Coordinates

chr4:-:10513764..10514291

Molecular Weight (calculated)

18353.0 Da

IEP (calculated)

8.571

GRAVY (calculated)

0.090

Length

175 amino acids

Sequence
(BLAST)

001: MAAAAAMMVS GGRAALAVAG VLCAVAAMAA AQQASNVRAT YHLYNPAQNG WDLNRVSAYC ATWDADKPLS WRQKHGWTAF CGPAGQKGQA ACGKCIRVCG
101: SATFTFPPAG LSQAIVGLLQ VKNRATGASI VARIVDQCSN GGLDLDYETV FKKIDTNGQG YQMGHLNVDY QFVAC

Best Arabidopsis Sequence Match ( AT3G04720.1 )
(BLAST)

001: MKIRLSITII LLSYTVATVA GQQCGRQGGG RTCPGNICCS QYGYCGTTAD YCSPTNNCQS NCWGSGPSGP GESASNVRAT YHFYNPAQNN WDLRAVSAYC
101: STWDADKPYA WRSKYGWTAF CGPAGPRGQA SCGKCLRVKN TRTNAAVTVR IVDQCSNGGL DLDVAMFNQI DTDGFGYQQG HLIVDYQFVD CGNELIGQPD
201: SRNMLVSAID RV

Arabidopsis Description

HELHevein-like preproprotein [Source:UniProtKB/Swiss-Prot;Acc:P43082]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.