Factsheet for VIT_14s0081g00050.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	golgi, vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

extracellular: 23391302

msms PMID: 23391302 doi

B Delaunois, T Colby, N Belloy, A Conreux, A Harzen, F Baillieul, C Clément, J Schmidt, P Jeandet, S Cordelier

Université de Reims Champagne-Ardenne, UFR Sciences Exactes et Naturelles, Unité de Recherche Vigne et Vins de Champagne - EA 4707, Laboratoire de Stress, Défenses et Reproduction des Plantes, B,P, 1039, Reims, cedex 02, 51687, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0081g00030.t01	Wine grape	extracellular	55.33	76.22
GSMUA_Achr1P23250_001	Banana	extracellular	53.81	74.13
TraesCS6B01G446400.1	Wheat	extracellular	53.3	72.41
TraesCS6D01G386800.1	Wheat	extracellular	52.28	71.03
TraesCS1A01G355300.1	Wheat	extracellular	52.28	71.03
GSMUA_Achr6P01350_001	Banana	extracellular	51.78	70.34
GSMUA_Achr6P01380_001	Banana	extracellular	51.78	70.34
TraesCS1D01G355100.1	Wheat	extracellular	51.78	70.34
TraesCS6A01G403200.1	Wheat	extracellular	51.78	70.34
TraesCS1B01G366300.2	Wheat	extracellular	47.72	69.63
TraesCS3B01G584700.1	Wheat	extracellular	50.76	68.49
HORVU3Hr1G113120.1	Barley	extracellular	50.76	68.49
TraesCS3A01G517100.1	Wheat	extracellular	49.75	67.12
TraesCS6B01G446300.1	Wheat	extracellular	42.13	66.94
TraesCS3D01G524700.1	Wheat	extracellular	50.25	66.89
Os11t0592000-01	Rice	extracellular	50.76	66.67
HORVU3Hr1G113620.1	Barley	extracellular	49.24	66.44
Zm00001d048949_P001	Maize	extracellular	49.75	65.77
Zm00001d048950_P001	Maize	extracellular	49.75	65.33
Os11t0592100-01	Rice	extracellular	48.73	63.16
EES08758	Sorghum	extracellular	47.21	62.42
EES08760	Sorghum	extracellular	47.72	62.25
Os11t0592200-01	Rice	extracellular	45.69	61.64
EES08759	Sorghum	extracellular	46.7	60.93
Zm00001d048948_P001	Maize	extracellular, mitochondrion	45.69	59.21
TraesCS2D01G552100.1	Wheat	extracellular	48.73	58.54
TraesCS2B01G582100.1	Wheat	extracellular	48.73	58.54
TraesCS2B01G581900.1	Wheat	extracellular	49.24	58.43
TraesCS2B01G582000.1	Wheat	extracellular	48.73	57.83
TraesCS2A01G551000.1	Wheat	extracellular, unclear	48.73	57.83
HORVU2Hr1G120530.1	Barley	extracellular	48.22	57.23
Os11t0591800-01	Rice	extracellular	42.64	53.16
Zm00001d048947_P001	Maize	extracellular	47.21	53.14
TraesCS2B01G581800.1	Wheat	extracellular	30.96	48.41
HORVU6Hr1G092630.3	Barley	extracellular, plastid	48.73	38.25
VIT_14s0081g00020.t01	Wine grape	extracellular, mitochondrion, plasma membrane, plastid	25.38	32.89

Protein Annotations

EntrezGene:100260476	wikigene:100260476	Gene3D:2.40.40.10	Gene3D:3.30.60.10	MapMan:35.1	InterPro:Barwin_CS
InterPro:Barwin_dom	ProteinID:CCB58729	ProteinID:CCB58729.1	InterPro:Chitin-bd_1	InterPro:Chitin-binding_1_CS	InterPro:Endochitinase-like_sf
UniProt:F6HVL6	EMBL:FN596256	GO:GO:0003674	GO:GO:0003824	GO:GO:0004518	GO:GO:0004540
GO:GO:0005488	GO:GO:0006139	GO:GO:0006950	GO:GO:0008061	GO:GO:0008150	GO:GO:0008152
GO:GO:0009605	GO:GO:0009607	GO:GO:0009615	GO:GO:0009627	GO:GO:0009628	GO:GO:0009651
GO:GO:0009719	GO:GO:0009723	GO:GO:0009817	GO:GO:0009987	GO:GO:0016787	GO:GO:0042742
GO:GO:0050832	GO:GO:0080027	GO:GO:0090501	InterPro:IPR001002	InterPro:IPR001153	InterPro:IPR036861
InterPro:IPR036908	EntrezGene:LOC100260476	wikigene:LOC100260476	PFAM:PD000609	PFAM:PD004535	PFAM:PF00187
PFAM:PF00967	PRINTS:PR00451	PRINTS:PR00602	ScanProsite:PS00026	ScanProsite:PS00771	ScanProsite:PS00772
PFscan:PS50941	PFscan:PS51174	PFscan:PS51257	PANTHER:PTHR22595	PANTHER:PTHR22595:SF71	InterPro:RlpA-like_sf
SMART:SM00270	SUPFAM:SSF50685	SUPFAM:SSF57016	SignalP:SignalP-noTM	UniParc:UPI00015CCE83	ArrayExpress:VIT_14s0081g00050
EnsemblPlantsGene:VIT_14s0081g00050	EnsemblPlants:VIT_14s0081g00050.t01	RefSeq:XP_002264647	RefSeq:XP_002264647.1	SEG:seg	:

Description

No Description!

Coordinates

chr14:+:7599109..7600455

Molecular Weight (calculated)

20484.8 Da

IEP (calculated)

6.669

GRAVY (calculated)

-0.157

Length

197 amino acids

Sequence
(BLAST)

001: MEGKIIYMVA VLLSLVACAA AQQCGRQAGG RTCANNLCCS QYGYCGTTAE YCSPSQSCQS NCQSGGGSSG GGGTGASASN VRATYHYYNP EQHGWDLNAV
101: SAYCATWDAN KSLAWRSKYG WTAFCGPAGP TGQAACGKCL KVTNTGTGTQ ATVRIVDQCS NGGLDLDVAV FNQLDTNGVG YLQGHLIVNY QFVDCGD

Best Arabidopsis Sequence Match ( AT3G04720.1 )
(BLAST)

001: MKIRLSITII LLSYTVATVA GQQCGRQGGG RTCPGNICCS QYGYCGTTAD YCSPTNNCQS NCWGSGPSGP GESASNVRAT YHFYNPAQNN WDLRAVSAYC
101: STWDADKPYA WRSKYGWTAF CGPAGPRGQA SCGKCLRVKN TRTNAAVTVR IVDQCSNGGL DLDVAMFNQI DTDGFGYQQG HLIVDYQFVD CGNELIGQPD
201: SRNMLVSAID RV

Arabidopsis Description

HELHevein-like preproprotein [Source:UniProtKB/Swiss-Prot;Acc:P43082]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.