Factsheet for Os11t0592100-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

extracellular: 21255809
extracellular: 24083427

msms PMID: 21255809 doi

T Shinano, S Komatsu, T Yoshimura, S Tokutake, FJ Kong, T Watanabe, J Wasaki, M Osaki

National Agriculture and Food Research Organization, National Agricultural Research Center for Hokkaido Region, 1-Hitsujigaoka, Toyohira-ku, Sapporo 062-8555, Japan. shinano@affrc.go.jp

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0592000-01	Rice	extracellular	83.55	84.67
HORVU3Hr1G113120.1	Barley	extracellular	76.32	79.45
TraesCS3A01G517100.1	Wheat	extracellular	75.0	78.08
TraesCS3D01G524700.1	Wheat	extracellular	75.66	77.7
HORVU3Hr1G113620.1	Barley	extracellular	74.34	77.4
TraesCS3B01G584700.1	Wheat	extracellular	74.34	77.4
GSMUA_Achr1P23250_001	Banana	extracellular	69.74	74.13
GSMUA_Achr6P01380_001	Banana	extracellular	68.42	71.72
VIT_14s0081g00030.t01	Wine grape	extracellular	66.45	70.63
Os11t0592200-01	Rice	extracellular	67.76	70.55
GSMUA_Achr6P01350_001	Banana	extracellular	66.45	69.66
TraesCS2D01G552100.1	Wheat	extracellular	73.68	68.29
TraesCS2A01G551000.1	Wheat	extracellular, unclear	74.34	68.07
HORVU2Hr1G120530.1	Barley	extracellular	74.34	68.07
TraesCS2B01G581900.1	Wheat	extracellular	73.68	67.47
TraesCS2B01G582000.1	Wheat	extracellular	73.03	66.87
TraesCS2B01G582100.1	Wheat	extracellular	71.71	66.46
Os11t0591800-01	Rice	extracellular	65.13	62.66
TraesCS2B01G581800.1	Wheat	extracellular	50.0	60.32
VIT_14s0081g00050.t01	Wine grape	extracellular	63.16	48.73

Protein Annotations

Gene3D:2.40.40.10	MapMan:35.1	EntrezGene:4350822	ProteinID:ABA94531.1	EMBL:AK063234	ProteinID:BAF28552.1
ProteinID:BAT14681.1	InterPro:Barwin_CS	InterPro:Barwin_dom	GO:GO:0006950	GO:GO:0008150	GO:GO:0009605
GO:GO:0009607	GO:GO:0042742	GO:GO:0050832	InterPro:IPR001153	InterPro:IPR036908	EnsemblPlantsGene:Os11g0592100
EnsemblPlants:Os11t0592100-01	PFAM:PD004535	PFAM:PF00967	PRINTS:PR00602	ScanProsite:PS00771	ScanProsite:PS00772
PFscan:PS51174	PANTHER:PTHR22595	PANTHER:PTHR22595:SF59	UniProt:Q2R1V1	InterPro:RlpA-like_sf	SUPFAM:SSF50685
SignalP:SignalP-noTM	UniParc:UPI0000681F58	RefSeq:XP_015615476.1	SEG:seg	:	:

Description

PATHOGENESIS-RELATED GENE 4BSimilar to Barwin. (Os11t0592100-01)

Coordinates

chr11:+:22505993..22507412

Molecular Weight (calculated)

16607.6 Da

IEP (calculated)

4.336

GRAVY (calculated)

-0.105

Length

152 amino acids

Sequence
(BLAST)

001: MMVMAMMRRV VMVVAVLCAV ATMAMAQEAS NVRATYHYYR PAENNWDLGA PAVSAYCATW DADKPLEWRQ KYGWTAFCGP VGPTGQDACG KCLSVTNTAT
101: GDQITARIVD QCANGGLDLD WDTVFSKIDS DGQGYQNGHL IVDYQFVDCG DN

Best Arabidopsis Sequence Match ( AT3G04720.1 )
(BLAST)

001: MKIRLSITII LLSYTVATVA GQQCGRQGGG RTCPGNICCS QYGYCGTTAD YCSPTNNCQS NCWGSGPSGP GESASNVRAT YHFYNPAQNN WDLRAVSAYC
101: STWDADKPYA WRSKYGWTAF CGPAGPRGQA SCGKCLRVKN TRTNAAVTVR IVDQCSNGGL DLDVAMFNQI DTDGFGYQQG HLIVDYQFVD CGNELIGQPD
201: SRNMLVSAID RV

Arabidopsis Description

HELHevein-like preproprotein [Source:UniProtKB/Swiss-Prot;Acc:P43082]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.