Factsheet for HORVU2Hr1G120530.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

extracellular: 26928395

msms PMID: 26928395 doi

A Sultan, B Andersen, B Svensson, C Finnie

Agricultural and Environmental Proteomics, Department of Systems Biology, Technical University of Denmark , Søltofts Plads, Building 224, DK-2800 Kgs. Lyngby, Denmark., Enzyme and Protein Chemistry, Department of Systems Biology, Technical University of Denmark , Elektrovej, Building 375, DK-2800 Kgs. Lyngby, Denmark.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G551000.1	Wheat	extracellular, unclear	94.58	94.58
TraesCS2B01G582100.1	Wheat	extracellular	93.37	94.51
TraesCS2D01G552100.1	Wheat	extracellular	92.77	93.9
TraesCS2B01G582000.1	Wheat	extracellular	93.37	93.37
TraesCS2B01G581900.1	Wheat	extracellular	93.37	93.37
TraesCS2B01G581800.1	Wheat	extracellular	67.47	88.89
HORVU3Hr1G113120.1	Barley	extracellular	75.3	85.62
HORVU3Hr1G113620.1	Barley	extracellular	72.89	82.88
Os11t0592000-01	Rice	extracellular	71.69	79.33
Os11t0592100-01	Rice	extracellular	68.07	74.34
GSMUA_Achr1P23250_001	Banana	extracellular	61.45	71.33
GSMUA_Achr6P01380_001	Banana	extracellular	62.05	71.03
GSMUA_Achr6P01350_001	Banana	extracellular	61.45	70.34
VIT_14s0081g00030.t01	Wine grape	extracellular	59.64	69.23
Os11t0591800-01	Rice	extracellular	62.05	65.19
VIT_14s0081g00050.t01	Wine grape	extracellular	57.23	48.22
HORVU6Hr1G092630.3	Barley	extracellular, plastid	65.06	43.03
HORVU6Hr1G080540.1	Barley	extracellular	34.34	32.39

Protein Annotations

Gene3D:2.40.40.10	MapMan:35.1	InterPro:Barwin_CS	InterPro:Barwin_dom	GO:GO:0006950	GO:GO:0008150
GO:GO:0009605	GO:GO:0009607	GO:GO:0042742	GO:GO:0050832	EnsemblPlantsGene:HORVU2Hr1G120530	EnsemblPlants:HORVU2Hr1G120530.1
InterPro:IPR001153	InterPro:IPR036908	UniProt:M0W8Z2	PFAM:PD004535	PFAM:PF00967	PRINTS:PR00602
ScanProsite:PS00772	PFscan:PS51174	PANTHER:PTHR22595	PANTHER:PTHR22595:SF59	InterPro:RlpA-like_sf	SUPFAM:SSF50685
SignalP:SignalP-noTM	UniParc:UPI000295FD34	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:748969429..748970797

Molecular Weight (calculated)

17710.7 Da

IEP (calculated)

7.390

GRAVY (calculated)

-0.151

Length

166 amino acids

Sequence
(BLAST)

001: MAARLALVAA LLCAGAAAAA AQQASNVRAT YHFYRPAQNN WDLGAPAVSA YCSTWDAGKP LSWRSKYGWT AFCGPAGPRG QASCGRCIRV TNTGTGAQIT
101: ARIVDQCANG GLDLDWDTVF VKIDTDGMGY QRGHLIVNYE FVNCGDNHVE FHGKNETLPA STHAVE

Best Arabidopsis Sequence Match ( AT3G04720.1 )
(BLAST)

001: MKIRLSITII LLSYTVATVA GQQCGRQGGG RTCPGNICCS QYGYCGTTAD YCSPTNNCQS NCWGSGPSGP GESASNVRAT YHFYNPAQNN WDLRAVSAYC
101: STWDADKPYA WRSKYGWTAF CGPAGPRGQA SCGKCLRVKN TRTNAAVTVR IVDQCSNGGL DLDVAMFNQI DTDGFGYQQG HLIVDYQFVD CGNELIGQPD
201: SRNMLVSAID RV

Arabidopsis Description

HELHevein-like preproprotein [Source:UniProtKB/Swiss-Prot;Acc:P43082]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.