Factsheet for GSMUA_Achr6P01380_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P01350_001	Banana	extracellular	96.55	96.55
GSMUA_Achr1P23250_001	Banana	extracellular	82.76	83.92
VIT_14s0081g00030.t01	Wine grape	extracellular	73.1	74.13
GSMUA_Achr8P31800_001	Banana	extracellular	69.66	70.14
Os11t0592000-01	Rice	extracellular	72.41	70.0
TraesCS3B01G584700.1	Wheat	extracellular	70.34	69.86
HORVU3Hr1G113120.1	Barley	extracellular	70.34	69.86
TraesCS3D01G524700.1	Wheat	extracellular	70.34	68.92
HORVU3Hr1G113620.1	Barley	extracellular	68.97	68.49
Os11t0592100-01	Rice	extracellular	71.72	68.42
TraesCS3A01G517100.1	Wheat	extracellular	68.28	67.81
Zm00001d048949_P001	Maize	extracellular	68.97	67.11
TraesCS6D01G386800.1	Wheat	extracellular	66.21	66.21
TraesCS1A01G355300.1	Wheat	extracellular	66.21	66.21
TraesCS6B01G446400.1	Wheat	extracellular	66.21	66.21
Zm00001d048950_P001	Maize	extracellular	68.28	66.0
TraesCS1D01G355100.1	Wheat	extracellular	65.52	65.52
TraesCS1B01G366300.2	Wheat	extracellular	60.69	65.19
EES08758	Sorghum	extracellular	66.9	65.1
TraesCS6A01G403200.1	Wheat	extracellular	64.83	64.83
TraesCS6B01G446300.1	Wheat	extracellular	54.48	63.71
Os11t0592200-01	Rice	extracellular	63.45	63.01
EES08759	Sorghum	extracellular	65.52	62.91
EES08760	Sorghum	extracellular	65.52	62.91
TraesCS2D01G552100.1	Wheat	extracellular	70.34	62.2
HORVU2Hr1G120530.1	Barley	extracellular	71.03	62.05
TraesCS2B01G582100.1	Wheat	extracellular	68.97	60.98
TraesCS2B01G581900.1	Wheat	extracellular	69.66	60.84
TraesCS2A01G551000.1	Wheat	extracellular, unclear	68.97	60.24
TraesCS2B01G582000.1	Wheat	extracellular	68.28	59.64
Zm00001d048948_P001	Maize	extracellular, mitochondrion	62.07	59.21
Os11t0591800-01	Rice	extracellular	64.14	58.86
TraesCS2B01G581800.1	Wheat	extracellular	46.9	53.97
Zm00001d048947_P001	Maize	extracellular	63.45	52.57
VIT_14s0081g00050.t01	Wine grape	extracellular	70.34	51.78
HORVU6Hr1G092630.3	Barley	extracellular, plastid	64.14	37.05

Protein Annotations

Gene3D:2.40.40.10	MapMan:35.1	InterPro:Barwin_CS	InterPro:Barwin_dom	GO:GO:0006950	GO:GO:0008150
GO:GO:0009605	GO:GO:0009607	GO:GO:0042742	GO:GO:0050832	EnsemblPlantsGene:GSMUA_Achr6G01380_001	EnsemblPlants:GSMUA_Achr6P01380_001
EnsemblPlants:GSMUA_Achr6T01380_001	InterPro:IPR001153	InterPro:IPR036908	UniProt:M0T386	PFAM:PD004535	PFAM:PF00967
PRINTS:PR00602	ScanProsite:PS00771	ScanProsite:PS00772	PFscan:PS51174	PANTHER:PTHR22595	PANTHER:PTHR22595:SF59
InterPro:RlpA-like_sf	SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI000295F6C2	SEG:seg	:

Description

Wound-induced protein WIN1 [Source:GMGC_GENE;Acc:GSMUA_Achr6G01380_001]

Coordinates

chr6:-:898819..899627

Molecular Weight (calculated)

15655.3 Da

IEP (calculated)

8.030

GRAVY (calculated)

-0.211

Length

145 amino acids

Sequence
(BLAST)

001: MTMSAKVSSV VAVLLCVAAA ASAQQASNVR ATYHYYYPAQ NNWDLNRVSA YCATWDANKP LEWRKKYGWT AFCGPVGPTG RDACGKCLRV TNTATGTQAT
101: VRIVDQCANG GLDLDQGVFS QLDTDGGGYN RGHLIVNYQF VNCGD

Best Arabidopsis Sequence Match ( AT3G04720.1 )
(BLAST)

001: MKIRLSITII LLSYTVATVA GQQCGRQGGG RTCPGNICCS QYGYCGTTAD YCSPTNNCQS NCWGSGPSGP GESASNVRAT YHFYNPAQNN WDLRAVSAYC
101: STWDADKPYA WRSKYGWTAF CGPAGPRGQA SCGKCLRVKN TRTNAAVTVR IVDQCSNGGL DLDVAMFNQI DTDGFGYQQG HLIVDYQFVD CGNELIGQPD
201: SRNMLVSAID RV

Arabidopsis Description

HELHevein-like preproprotein [Source:UniProtKB/Swiss-Prot;Acc:P43082]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.