Factsheet for Zm00001d048950_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
golgi 4
plasma membrane 4
endoplasmic reticulum 4
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048949_P001	Maize	extracellular	94.67	95.3
EES08758	Sorghum	extracellular	83.33	83.89
TraesCS6B01G446400.1	Wheat	extracellular	76.67	79.31
TraesCS6D01G386800.1	Wheat	extracellular	76.0	78.62
TraesCS6B01G446300.1	Wheat	extracellular	63.33	76.61
TraesCS1A01G355300.1	Wheat	extracellular	72.67	75.17
TraesCS6A01G403200.1	Wheat	extracellular	72.67	75.17
TraesCS1D01G355100.1	Wheat	extracellular	72.0	74.48
TraesCS1B01G366300.2	Wheat	extracellular	66.67	74.07
GSMUA_Achr1P23250_001	Banana	extracellular	68.0	71.33
VIT_14s0081g00030.t01	Wine grape	extracellular	68.0	71.33
GSMUA_Achr6P01380_001	Banana	extracellular	66.0	68.28
GSMUA_Achr6P01350_001	Banana	extracellular	64.67	66.9
Zm00001d048948_P001	Maize	extracellular, mitochondrion	66.67	65.79
Zm00001d048947_P001	Maize	extracellular	69.33	59.43
Zm00001d049214_P001	Maize	extracellular	54.67	54.67
VIT_14s0081g00050.t01	Wine grape	extracellular	65.33	49.75
HORVU6Hr1G092630.3	Barley	extracellular, plastid	71.33	42.63

Protein Annotations

EntrezGene:103652814	Gene3D:2.40.40.10	MapMan:35.1	ProteinID:AQK49232.1	UniProt:B4FS23	EMBL:BT039911
InterPro:Barwin_CS	InterPro:Barwin_dom	EMBL:EU968294	GO:GO:0006950	GO:GO:0008150	GO:GO:0009605
GO:GO:0009607	GO:GO:0042742	GO:GO:0050832	InterPro:IPR001153	InterPro:IPR036908	PFAM:PD004535
PFAM:PF00967	PRINTS:PR00602	ScanProsite:PS00772	PFscan:PS51174	PANTHER:PTHR22595	PANTHER:PTHR22595:SF59
InterPro:RlpA-like_sf	SUPFAM:SSF50685	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00017B7D92	EnsemblPlantsGene:Zm00001d048950
EnsemblPlants:Zm00001d048950_P001	EnsemblPlants:Zm00001d048950_T001	SEG:seg	:	:	:

Description

GRMZM2G117942Hevein-like preproprotein

Coordinates

chr4:+:10553796..10554681

Molecular Weight (calculated)

15775.5 Da

IEP (calculated)

5.672

GRAVY (calculated)

-0.008

Length

150 amino acids

Sequence
(BLAST)

001: MAGMTVGNKL ALAAVLLCAA AAMATAQQAS GVRATYNFYN PQQNNWDLNA VSAYCATWDA SKPLSWRMKY GWTAFCGPAG PTGQAACGQC LLVTNTATGA
101: SITVRIVDQC SNGGLDLDYD TAFKPIDTNG QGFQAGHLTV NYQFVNCGDN

Best Arabidopsis Sequence Match ( AT3G04720.1 )
(BLAST)

001: MKIRLSITII LLSYTVATVA GQQCGRQGGG RTCPGNICCS QYGYCGTTAD YCSPTNNCQS NCWGSGPSGP GESASNVRAT YHFYNPAQNN WDLRAVSAYC
101: STWDADKPYA WRSKYGWTAF CGPAGPRGQA SCGKCLRVKN TRTNAAVTVR IVDQCSNGGL DLDVAMFNQI DTDGFGYQQG HLIVDYQFVD CGNELIGQPD
201: SRNMLVSAID RV

Arabidopsis Description

HELHevein-like preproprotein [Source:UniProtKB/Swiss-Prot;Acc:P43082]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.