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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1B01G366300.2 Wheat extracellular 91.72 98.52
TraesCS1A01G355300.1 Wheat extracellular 97.24 97.24
TraesCS6D01G386800.1 Wheat extracellular 88.97 88.97
Zm00001d048949_P001 Maize extracellular 75.17 73.15
GSMUA_Achr1P23250_001 Banana extracellular 71.72 72.73
Zm00001d048950_P001 Maize extracellular 74.48 72.0
TraesCS3D01G524700.1 Wheat extracellular 73.1 71.62
VIT_14s0081g00030.t01 Wine grape extracellular 70.34 71.33
EES08758 Sorghum extracellular 71.03 69.13
GSMUA_Achr6P01350_001 Banana extracellular 66.9 66.9
TraesCS2D01G552100.1 Wheat extracellular 74.48 65.85
GSMUA_Achr6P01380_001 Banana extracellular 65.52 65.52
TraesCS6D01G311600.1 Wheat extracellular, plastid 61.38 64.96
TraesCS6D01G311500.1 Wheat extracellular 63.45 58.97
VIT_14s0081g00050.t01 Wine grape extracellular 70.34 51.78
Protein Annotations
Gene3D:2.40.40.10MapMan:35.1InterPro:Barwin_CSInterPro:Barwin_domGO:GO:0006950GO:GO:0008150
GO:GO:0009605GO:GO:0009607GO:GO:0042742GO:GO:0050832InterPro:IPR001153InterPro:IPR036908
PFAM:PD004535PFAM:PF00967PRINTS:PR00602ScanProsite:PS00771PFscan:PS51174PANTHER:PTHR22595
PANTHER:PTHR22595:SF59InterPro:RlpA-like_sfSUPFAM:SSF50685SignalP:SignalP-noTMEnsemblPlantsGene:TraesCS1D01G355100EnsemblPlants:TraesCS1D01G355100.1
SEG:seg:::::
Description
No Description!
Coordinates
chr1D:-:439874401..439874942
Molecular Weight (calculated)
15142.6 Da
IEP (calculated)
4.595
GRAVY (calculated)
0.034
Length
145 amino acids
Sequence
(BLAST)
001: MAGRMALAVV LLTAAAAAAA AQSASNVRAT YNYYSPEKIN WDLNAASAYC ATWDAGMSYA WRSKYGWTAF CGPAGPTGQA SCGKCLLVTN TATGAQITAR
101: IVDQCSNGGL DLDFDTVFSK IDTDGQGVAQ GHLTVSYQFV DCGDN
Best Arabidopsis Sequence Match ( AT3G04720.1 )
(BLAST)
001: MKIRLSITII LLSYTVATVA GQQCGRQGGG RTCPGNICCS QYGYCGTTAD YCSPTNNCQS NCWGSGPSGP GESASNVRAT YHFYNPAQNN WDLRAVSAYC
101: STWDADKPYA WRSKYGWTAF CGPAGPRGQA SCGKCLRVKN TRTNAAVTVR IVDQCSNGGL DLDVAMFNQI DTDGFGYQQG HLIVDYQFVD CGNELIGQPD
201: SRNMLVSAID RV
Arabidopsis Description
HELHevein-like preproprotein [Source:UniProtKB/Swiss-Prot;Acc:P43082]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.