CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES08759	Sorghum	extracellular	75.5	75.5
Os11t0592200-01	Rice	extracellular	70.2	72.6
Zm00001d048947_P001	Maize	extracellular	81.46	70.29
VIT_14s0081g00030.t01	Wine grape	extracellular	66.23	69.93
GSMUA_Achr1P23250_001	Banana	extracellular	64.9	68.53
EES08758	Sorghum	extracellular	65.56	66.44
GSMUA_Achr6P01350_001	Banana	extracellular	62.91	65.52
GSMUA_Achr6P01380_001	Banana	extracellular	62.91	65.52
OQU83426	Sorghum	extracellular	53.64	54.36
EES08702	Sorghum	extracellular	45.7	50.74
VIT_14s0081g00050.t01	Wine grape	extracellular	62.25	47.72

Protein Annotations

Gene3D:2.40.40.10	MapMan:35.1	EntrezGene:8062682	InterPro:Barwin_dom	UniProt:C5Y5D6	EnsemblPlants:EES08760
ProteinID:EES08760	ProteinID:EES08760.1	GO:GO:0006950	GO:GO:0008150	GO:GO:0009605	GO:GO:0009607
GO:GO:0042742	GO:GO:0050832	InterPro:IPR001153	InterPro:IPR036908	PFAM:PD004535	PFAM:PF00967
PRINTS:PR00602	PFscan:PS51174	PANTHER:PTHR22595	PANTHER:PTHR22595:SF59	InterPro:RlpA-like_sf	EnsemblPlantsGene:SORBI_3005G169400
SUPFAM:SSF50685	unigene:Sbi.4105	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A863B7	RefSeq:XP_002449772.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:64822949..64824100

Molecular Weight (calculated)

16080.1 Da

IEP (calculated)

8.857

GRAVY (calculated)

-0.044

Length

151 amino acids

Sequence
(BLAST)

001: MAAAMISGGR AAALVLAAVV LCSVAAMAAA QQASNVRATY HYYNPQQNNW NLNAVSAYCS TWDAGKPLAW RQKYGWTAFC GPAGQKGQAA CGKCIRVTNR
101: ATGAAITARI VDQCSNGGLD LDYETVFKKI DTNGQGYQMG HLNVNYQFVA C

Best Arabidopsis Sequence Match ( AT3G04720.1 )
(BLAST)

001: MKIRLSITII LLSYTVATVA GQQCGRQGGG RTCPGNICCS QYGYCGTTAD YCSPTNNCQS NCWGSGPSGP GESASNVRAT YHFYNPAQNN WDLRAVSAYC
101: STWDADKPYA WRSKYGWTAF CGPAGPRGQA SCGKCLRVKN TRTNAAVTVR IVDQCSNGGL DLDVAMFNQI DTDGFGYQQG HLIVDYQFVD CGNELIGQPD
201: SRNMLVSAID RV

Arabidopsis Description

HELHevein-like preproprotein [Source:UniProtKB/Swiss-Prot;Acc:P43082]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.