Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_10s0116g00500.t01 | Wine grape | nucleus | 69.01 | 65.33 |
| GSMUA_Achr9P11590_001 | Banana | nucleus | 66.2 | 59.49 |
| GSMUA_Achr3P25090_001 | Banana | nucleus | 39.44 | 45.9 |
| GSMUA_AchrUn_... | Banana | nucleus | 46.48 | 38.82 |
| GSMUA_Achr8P19880_001 | Banana | nucleus | 43.66 | 36.05 |
| GSMUA_Achr8P05730_001 | Banana | cytosol | 43.66 | 34.07 |
| GSMUA_Achr1P05080_001 | Banana | nucleus | 42.25 | 30.3 |
| GSMUA_Achr5P09460_001 | Banana | plastid | 38.03 | 17.53 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr10P09220_001 | EnsemblPlants:GSMUA_Achr10T09220_001 | EnsemblPlantsGene:GSMUA_Achr10G09220_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:IPR017930 | InterPro:Myb_dom | InterPro:SANT/Myb |
| PANTHER:PTHR10641 | PANTHER:PTHR10641:SF724 | PFAM:PF00249 | PFscan:PS51294 | SMART:SM00717 | SUPFAM:SSF46689 |
| UniParc:UPI0002964EAD | UniProt:M0RGP8 | MapMan:15.5.2.2 | : | : | : |
Description
Whole genome shotgun sequence of line PN40024, scaffold_59.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr10G09220_001]
Coordinates
chr10:+:19142480..19143112
Molecular Weight (calculated)
8299.4 Da
IEP (calculated)
4.121
GRAVY (calculated)
-1.165
Length
71 amino acids
Sequence
(BLAST)
(BLAST)
1: MEDLDRSSDD VDSKDGNSQD SKMDFSEDEE KLITRMYNLV GERWSLIAGR IPGRTAEEIE RYWTSRYSTS E
1: MNTQRKSKHL KTNPTIVASS SEEVSSLEWE EIAMAQEEED LICRMYKLVG ERWDLIAGRI PGRTAEEIER FWVMKNHRRS QLR
Arabidopsis Description
ETC1MYB-like transcription factor ETC1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNI5]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.