Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH27851 | Soybean | cytosol | 52.75 | 60.0 |
| KRH77639 | Soybean | cytosol | 52.75 | 60.0 |
| GSMUA_Achr3P25090_001 | Banana | nucleus | 39.56 | 59.02 |
| GSMUA_AchrUn_... | Banana | nucleus | 54.95 | 58.82 |
| PGSC0003DMT400000600 | Potato | nucleus | 39.56 | 58.06 |
| GSMUA_Achr8P19880_001 | Banana | nucleus | 52.75 | 55.81 |
| VIT_15s0046g01130.t01 | Wine grape | nucleus | 52.75 | 54.55 |
| VIT_16s0050g02530.t01 | Wine grape | nucleus | 50.55 | 52.27 |
| Solyc01g095640.1.1 | Tomato | nucleus | 50.55 | 48.94 |
| GSMUA_Achr10P... | Banana | nucleus | 34.07 | 43.66 |
| GSMUA_Achr1P05080_001 | Banana | nucleus | 43.96 | 40.4 |
| GSMUA_Achr9P11590_001 | Banana | nucleus | 31.87 | 36.71 |
| GSMUA_Achr5P09460_001 | Banana | plastid | 36.26 | 21.43 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P05730_001 | EnsemblPlants:GSMUA_Achr8T05730_001 | EnsemblPlantsGene:GSMUA_Achr8G05730_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:SANT/Myb | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF631 |
| SEG:seg | SUPFAM:SSF46689 | UniParc:UPI0002967950 | UniProt:M0TMX6 | MapMan:15.5.2.2 | : |
Description
Transcription factor TRY [Source:GMGC_GENE;Acc:GSMUA_Achr8G05730_001]
Coordinates
chr8:-:3733518..3735554
Molecular Weight (calculated)
10990.2 Da
IEP (calculated)
8.493
GRAVY (calculated)
-0.856
Length
91 amino acids
Sequence
(BLAST)
(BLAST)
1: MQVCLRFAEV SSKEWEFIHM SEQEEDLIRR MYRLNNYLLV CRWELVAGRI PGRKAEEIER YWIMRHGESF AEKRQKREAG EGGRCEGRRA P
001: MDNTDRRRRR KQHKIALHDS EEVSSIEWEF INMTEQEEDL IFRMYRLVGD RWDLIAGRVP GRQPEEIERY WIMRNSEGFA DKRRQLHSSS HKHTKPHRPR
101: FSIYPS
101: FSIYPS
Arabidopsis Description
TRYTRY [Source:UniProtKB/TrEMBL;Acc:A0A178UFU9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.