Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P25090_001 | Banana | nucleus | 41.41 | 67.21 |
| GSMUA_AchrUn_... | Banana | nucleus | 44.44 | 51.76 |
| HORVU3Hr1G055260.2 | Barley | nucleus | 35.35 | 46.05 |
| GSMUA_Achr8P19880_001 | Banana | nucleus | 39.39 | 45.35 |
| GSMUA_Achr8P05730_001 | Banana | cytosol | 40.4 | 43.96 |
| Zm00001d044194_P001 | Maize | nucleus | 34.34 | 43.59 |
| EES03290 | Sorghum | nucleus | 33.33 | 42.31 |
| GSMUA_Achr10P... | Banana | nucleus | 30.3 | 42.25 |
| GSMUA_Achr9P11590_001 | Banana | nucleus | 29.29 | 36.71 |
| GSMUA_Achr5P09460_001 | Banana | plastid | 37.37 | 24.03 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P05080_001 | EnsemblPlants:GSMUA_Achr1T05080_001 | EnsemblPlantsGene:GSMUA_Achr1G05080_001 | Gene3D:1.10.10.60 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | InterPro:Homeobox-like_sf | InterPro:SANT/Myb | PANTHER:PTHR10641 | PANTHER:PTHR10641:SF631 |
| PFAM:PF00249 | SMART:SM00717 | SUPFAM:SSF46689 | UniParc:UPI000296AD75 | UniProt:M0RX66 | MapMan:15.5.2.2 |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G05080_001]
Coordinates
chr1:+:4206028..4206845
Molecular Weight (calculated)
11465.9 Da
IEP (calculated)
7.421
GRAVY (calculated)
-0.607
Length
99 amino acids
Sequence
(BLAST)
(BLAST)
1: MLLPSLSPNL FDGPLICAEE VSNTERELTD MSEEEVDLIY RMHRLVGDRW ELIAGRIPGR TPEEIKRFWK MKNDPCFAEK GLKRKRAVQG TVAQVQNHK
1: MFRSDKAEKM DKRRRRQSKA KASCSEEVSS IEWEAVKMSE EEEDLISRMY KLVGDRWELI AGRIPGRTPE EIERYWLMKH GVVFANRRRD FFRK
Arabidopsis Description
CPCTranscription factor CPC [Source:UniProtKB/Swiss-Prot;Acc:O22059]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.